Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00889 |
Symbol | RSp0430 |
ID | 1222737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 543732 |
End bp | 544763 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637240290 |
Product | alcohol dehydrogenase |
Protein accession | NP_521991 |
Protein GI | 17548651 |
COG category | [R] General function prediction only |
COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0950083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAGA AAAAGACATA CAAAGCGATG CAGGTGACCG GGCCAGGCGT GCTGGAAATG GTTGAACGGG ATACGCCGAC ACCAGCGATC GGTGAGGTCC TGATCCAGGT GGAGGCATGC GGCATCTGCG GTGCCGATGC AGGTGTCATT GAAGGACGGG AGGCCGGGCT GCAGTACCCA CGCGTTCCGG GCCACGAAGT CGTCGGGCGC ATCGTGGCGA CCGGACCCGG TACCGCTTCG ATCTGGAGGG TGGGCCAGCG TGTAGGTGTG GGCCGGCTGG GCGGACACTG CAACGAATGC GAGCAGTGCC GACGCGGGCA ATTCCAGCTC TGCAGGAACC AGCCCATTGT GGGGAGCACA CAAGACGGCG GCTATGCGGA AATGATGCTG GCCCGCAGCA CAGGGCTGGT CTCGATCCCC GACACACTTA GCTCGGAAGC GGCAGCCCCC ATTCTGTGCG CCGGCATTGC CACCTTCAAC GCGCTCAGGA AATCGGGCGC GCAGGCAGGC GATCTCGTTG CCATCCAGGG CATTGGGGGC CTGGGGCACA TGGCCATCCA GTACGCGCGC AGGATGGGCT TTCGGGTTGT GGCCGTAGGC CGAGGCACCG ATATCGTCAA CGACGTTCGC GCGTTGGGTG CGCACATCTA TATCGACACC CATATCGAGG ATCCGGCGGT CCGGCTGCGG GAATTGGGCG GGGCGCAGGT GATCTTGACC ACCATCACGG ACAGCGCCGC GGCCTCCCCG CTCATGTCGG CCCTCGCGCC TCAAGGACGG TTGCTTGTCG TTGGCGTCGG ACAAGCGCCG CTGGCCGTCA TGCCCAGCGC CCTGGTAGGT GGTGAACGCA TGGTCCAGGG AACCCTCACT GGCTCGCCTT TTGAATCCGA GAAGGCTCTG GACTTCAGCG TCCTGACAGA CGTTCGTCCG CTGATCGAAA CCATGCCGCT TGAGAAGGCG CACGAAGCGT ACCAGCGCAT GATGTCGGGG CAAGTCAAGT TCCGCATGGT GCTGACGATG AACGCCGGTT GA
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Protein sequence | MPEKKTYKAM QVTGPGVLEM VERDTPTPAI GEVLIQVEAC GICGADAGVI EGREAGLQYP RVPGHEVVGR IVATGPGTAS IWRVGQRVGV GRLGGHCNEC EQCRRGQFQL CRNQPIVGST QDGGYAEMML ARSTGLVSIP DTLSSEAAAP ILCAGIATFN ALRKSGAQAG DLVAIQGIGG LGHMAIQYAR RMGFRVVAVG RGTDIVNDVR ALGAHIYIDT HIEDPAVRLR ELGGAQVILT TITDSAAASP LMSALAPQGR LLVVGVGQAP LAVMPSALVG GERMVQGTLT GSPFESEKAL DFSVLTDVRP LIETMPLEKA HEAYQRMMSG QVKFRMVLTM NAG
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