| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00881 |
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| Symbol | RSp0424 |
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| ID | 1222731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 538823 |
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| End bp | 540064 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240284 |
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| Product | diaminopimelate decarboxylase protein |
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| Protein accession | NP_521985 |
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| Protein GI | 17548645 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0145136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGGG AACTGATCGA ACGCTATCTC CAGGGCGCGA CCTCGCCCGT CTGCGCCTAT
CTCTACGACC TCGACCACTT GCGCGAGCGG GCCGCGCGGC TCAGCGCGAT GCTGCCGCCC
GGCTGCGAGC TGTTCTACGC GATCAAGGCC AACAGCGATG CGCCCGTGCT GGCGGCGCTC
GATGGTGCGG TGGCCGGCTA CGAGGTCGCC TCGCTCGGCG AGGTGGTGCG CGCGCGCGAA
GTCGGCGCGC AGGCGCGGAT CGTCTTCGGC GGCCCCGGCA AGACCGACGA TGAGCTGCAG
GGCGCGCTCG AACGCGGGGT CGAACTGATC CACGTCGAAA GCGAGTTGCA ACTGCGCAGG
CTCGACGCGA TTGCGTGCCG GATGGGGCGG CGCGCCCGCG TGCTGCTGCG CGTCAACCCC
AACCCGCTGT CGGCGGATGC CGTGGGCAAG CGTGCGCAAG GCACGCTGAC CATGGGCGGC
CAGCCGACGC AATTCGGCAT CGAAGAGGAC GCGGTGCCCG ATCTGATCCG CCTGGCGCGG
ACCTTGCCGG GCGTCGAGGT GGTCGGCCTG CATCTGCATG CCTTGTCCAA CAACCTCGAT
GCCGATTCGC ATCTCGCGCT GATGCGCCAC TACCTTTCTC TGGCGCTGCG CTTGCGCCGC
GAGCACGGGT TGACGCTCGA CACGCTGAAC GTCGGCGGCG GCATCGGTGT GGACTACGCG
GATCCGTCCC ATGCATTCGA CTGGCGGCGG TTCTGCGATG GGCTCGGGGT GCTGCTCGCC
GAGGCCGGCG CCGGCTGCCG GATCGTGTTC GAGTGCGGGC GTTTCATCGC GGCCGACTGC
GGCTATTACG TCACCGAGGT GGTGGACCTC AAGCGCAATC ACGGCCGGTG GTTCGCCGTG
CTGCGCGGCG GCACGCATCA CTTCAGGCTG CCGGCATCGT GGCAGCACAA TCATCCGTTC
GCGATCCTGC CGAATGCGCG ATGGGACTAC CCGTTCGAGC GGCCATCGGT GCTGGCGCAG
GCGGTCACGC TGTGCGGCGA GCTGTGTACG CCGAAGGACG TGCTGGCGCG CGACGTCGTG
GTGGACCGCC TGCGCGTCGG CGACCGCATC GTGTTCCAGC TGGCGGGCGC CTACGGCTGG
CACATCTCGC ACCATGACTT CCTGAGCCAT CCGCATCCCG AGCGTCGCTT CGTGGGGGCG
TTGCATGCGG CGAGCGATGC GCGCCTGGAA GTCGCTGCAT AG
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| Protein sequence | MHRELIERYL QGATSPVCAY LYDLDHLRER AARLSAMLPP GCELFYAIKA NSDAPVLAAL
DGAVAGYEVA SLGEVVRARE VGAQARIVFG GPGKTDDELQ GALERGVELI HVESELQLRR
LDAIACRMGR RARVLLRVNP NPLSADAVGK RAQGTLTMGG QPTQFGIEED AVPDLIRLAR
TLPGVEVVGL HLHALSNNLD ADSHLALMRH YLSLALRLRR EHGLTLDTLN VGGGIGVDYA
DPSHAFDWRR FCDGLGVLLA EAGAGCRIVF ECGRFIAADC GYYVTEVVDL KRNHGRWFAV
LRGGTHHFRL PASWQHNHPF AILPNARWDY PFERPSVLAQ AVTLCGELCT PKDVLARDVV
VDRLRVGDRI VFQLAGAYGW HISHHDFLSH PHPERRFVGA LHAASDARLE VAA
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