| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00880 |
|---|
| Symbol | RSp0423 |
|---|
| ID | 1222730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 538035 |
|---|
| End bp | 538838 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637240283 |
|---|
| Product | aldolase protein |
|---|
| Protein accession | NP_521984 |
|---|
| Protein GI | 17548644 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0143693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC CGCAGTCGCT CAAGGCCCGG CTGCGGCAGG CGGAAGGCCG GCCGCTGGTC
GGGCTGTTCT GCTCGACGCC CGCGCCGCTG ATGGTCGAAC TGATCGCGGC GGCCGGCTAC
GACTTTGTCG TGATCGACCT GGAGCACACG CTGCTCGACG GCACCGCGCT GACGGCCATG
CTGCTCGCCG CGCGCGCCAG CGGCATGGCG GCGCTGGTGC GGGTCGCCGC GCCCCTCCAG
ATCGTGCAGG TGCTGGATGC CGGAGCGCAG GGCGTGGTCA TCCCGCGTGT CCGCTCGGTC
GAGGAGGCGC GTGAGGCGGT CACGGCCGCC CATCACGCGC CGCTCGGCCG GCGCGGGCTG
AATGCGACCT GCGCGAGCCG CTTCGGCCGC GACGACCTGG CCCGGACAGT TGCGCGGGCG
GCGGCGGACA CGCTGGTTGT CGCGATGATC GAAGACCGCG CGGGGCTCGA TGCACTGGAC
GCGATAGCCG CCGTCGATGG CGTCGACGTG CTGCTTGGCG GCGCGGCGGA CCTGTCGCAG
GACCTGGGCA TGCCCTGGCA GACAGGGCAC GCCGACGTGC GCGCGGCGAT CGCGCGGGTG
GCCGCCGCCG CGCGCCGCCA CGGCAAGGTG TTCTGCGCCC TGCCGCGCCA TACCGACGAC
ATCGCGGACA TGCATCGCAC GGGCGTGCGC CTGGCGATTG CCGGCGACGA CCGCGGCATT
GCGCGTCGCG CGATGGCCGC GCAATTGCAG GCGCTTTTGC CTGATCTCGA ACACGAAGGA
GCCGCCCGAT GCACCGGGAA CTGA
|
|---|
| Protein sequence | MSAPQSLKAR LRQAEGRPLV GLFCSTPAPL MVELIAAAGY DFVVIDLEHT LLDGTALTAM
LLAARASGMA ALVRVAAPLQ IVQVLDAGAQ GVVIPRVRSV EEAREAVTAA HHAPLGRRGL
NATCASRFGR DDLARTVARA AADTLVVAMI EDRAGLDALD AIAAVDGVDV LLGGAADLSQ
DLGMPWQTGH ADVRAAIARV AAAARRHGKV FCALPRHTDD IADMHRTGVR LAIAGDDRGI
ARRAMAAQLQ ALLPDLEHEG AARCTGN
|
|---|
| |