| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00877 |
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| Symbol | RSp0420 |
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| ID | 1222727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 533214 |
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| End bp | 534431 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637240280 |
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| Product | multidrug resistance 1 transmembrane protein |
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| Protein accession | NP_521981 |
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| Protein GI | 17548641 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00243064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCC GCCCGAACCT TGCCGTCGTC ACGCTGATCG GCTGCCAGGC CGTGATCACG
CTGGGCCTGA TGGTGCTGGT GCCGATCATG CCGTTCTTTC TGCGCGACCT GATGGGCGGT
GGCGTTGCCG CCGCCGATGC GGTGCGCTGG ACCAGCATCG CGCTCGCCGC GCCCGGCGTC
GGCGCGCTGC TGTGCGCGCC GTTTGCCGGA CGGTGGTGCG AGCGCTTCGG CTACCGGCGC
GCGCTACTGC TGGCGCTGTC GCTGTTCGTG GCGAGCATGG CGATGATGGC GCTGTCGCGC
GGCCTCGCGA TGTTCATCGC CGGGCGCCTG CTGCAGGGCG CGAGCACTGT CGGCGTGATC
GTGACCGCGT TCATCGCGCG CGTCAGCGAT CCGGCCGGCC GGGGGCGCGC GCTGGGCTGG
CAGGAGTCGG CGGTGGCCGC CGGCGCGCTT GCCGGGCCGG TGCTCGGCGG CGTGCTGCAG
GATGTCTGGT CGGTGCGTCC GCTGCTGCTG GCCGTGGCCG TCTGTACCGG ATGCGCGGTG
CTGGGGCTGG CCCTCAGCCT GCGCGAGCCC GCGGCGCCGG CCACGCACGA GGCCTCGCCC
GAGGCCGGCG ACGGGCCGTC CGCCCGCGGC CTGCTCGCCG ATCCGGCGTT CGTGCGCTGG
CTGATGGCGG GCGCGCTGAC GCAGGCCGGC GCGTTCGCGC TCGTGAATGT GTTCGCGCTG
TTTGTCGAGG CGCGCTTTGC GGGCATGGCC GCGCTGGCCA GCAAGGTGGG CGTGCTGCAC
GCGCTCGGGT GGTGCGCGAC GCTGGTCGCC GGGCCGCTGT GGGGGGCCTG GAACGACCGC
CGCGATCCGG CGCGCCAGTT TGCCGGCGCG GCGCTCGCGT GCGCCCTGGC GCTCGCGCTG
ATGCCGTGGG CTGCCCATCT GTGGCAGATC GGCCTGCTGC GTGTCTTGCA GGGGGCCTGC
TACGCGGCGC TCGCGCAGTC GATGCTGCTG ATCTGCTGTC GCGCCGCGCC GCCCGCGCTC
CAGGGCCGGG CGACCGTGGT CGCGAAAAGC GCGATGACGC TCGGGCAATT GCTCGGGCCG
CTCGCCGTGC TCGTTGTTCT CCCGTTCACC GGACCTGCCG CGACGCTGTG GCTGACGGCG
GCGATGTTCA TCGCTGCCGC GGCCATCGCG CGGCCGAGGC TGGTGGTGCG TTTCTCTCCC
GTATCCGATC CGAGGTGA
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| Protein sequence | MTFRPNLAVV TLIGCQAVIT LGLMVLVPIM PFFLRDLMGG GVAAADAVRW TSIALAAPGV
GALLCAPFAG RWCERFGYRR ALLLALSLFV ASMAMMALSR GLAMFIAGRL LQGASTVGVI
VTAFIARVSD PAGRGRALGW QESAVAAGAL AGPVLGGVLQ DVWSVRPLLL AVAVCTGCAV
LGLALSLREP AAPATHEASP EAGDGPSARG LLADPAFVRW LMAGALTQAG AFALVNVFAL
FVEARFAGMA ALASKVGVLH ALGWCATLVA GPLWGAWNDR RDPARQFAGA ALACALALAL
MPWAAHLWQI GLLRVLQGAC YAALAQSMLL ICCRAAPPAL QGRATVVAKS AMTLGQLLGP
LAVLVVLPFT GPAATLWLTA AMFIAAAAIA RPRLVVRFSP VSDPR
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