| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00873 |
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| Symbol | RSp0416 |
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| ID | 1222723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 526754 |
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| End bp | 529192 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240276 |
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| Product | ferric siderophore receptor outer membrane signal peptide protein |
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| Protein accession | NP_521977 |
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| Protein GI | 17548637 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.193176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCATT TCGTGTGTGT GGCAGTTGCA GGCGGCTGCG TGTCGACCGT TGCCTGGGGG
CAGGGGGCGA CGGTGCCGAT CGACATTCCG GCGCAACGGC TGGACCGTGC GCTGACTGCG
CTCGCACAGC AATCCGGCGT ACCAATCCAG TTTGCCGATG CGCTTGCCGG GCAGCGGACC
GCGCAGGCGG TGCAGGGCCG GATGGCGGTC TCCGATGCGC TCGAGCGGCT GCTCGCGGGC
TCGGGGCTGC GGGCCCGGTC GACCGGGGCG AACACGTTCA CGGTCGAAGC GCAGGCGCAG
GACGTGCCGG CCAAGGCTGC CGCGGACGGG CCGGAGGCGC CGGCCGTGGC TGAACTCGAG
GCCACCGTGG TGTCCACCGA CCGCACGCGC AGCGACCTCG TCCGGCCGAC CCGCCAGGTC
ACGCAGATCA GCCACGAAGA GCTGGGCGAC CTGCAGGCCG GCTCGGGCAC CCTGGCGACG
GCGCTGAGCA AAGTGGTGCC CGGCATGGCC GATTCCAGCC ACACGATCAC CGACTACGGA
CAGACGTTGC GCGGCCGCGG CACGCTGGTG CTGCTCGACG GCATGCCACT CAATACCAAC
CGGGATTCCG CGCGCAACCT GGCCAGCCTC GACCCGAACA ACATCGAACG GATCGAAGTG
CTGCGCGGCA GCAGCGCGCT CTACGGCAGC GGGGCCACGG GCGGCATCGT GTCGATCACG
ACCCGGCCGG CCGGGGGCGA GCCGCGCGCC GAGACGACTG TCTCGATGAC CTCGCCGCTG
TCGCATCCCG GCGCCGCGGG CCTGGGCGGC GCGGTGCAGC AGTATGTGGC CGGCAGCAAG
GGGCCGGTCG ACTACGAATT CAATGTCGGC ACGCAGCATG TCGGCGGCTC CTATGACGCC
CGCGGCCACC GCATCGCGCC GGAGCCCAGC CAGGGCGATC TGTTCGATTC GAACATCTAC
AGCATCGGCG GCAAGCTCGG GCTGCGCATC GATCCGAACC AGCGCGTGGT GTTCTCAGCC
AGCCACTACG ACGCGAAGCA GGACACCGAC TACGCGAGCG ATCCGTCGGT CGCGCGGCTG
CCGGCGGGCT CGGCCGTGGC GCGCGCGATC AATGGACTGC AACTGGCCGA CCAGAACCGC
ATCAAGAACA CGCTGCTCAA CCTGCAATAC GAGAACAAGG ATGTGTTCGG CAGCCAGGTG
GGCGCCCAGT TCTACTACCG CGACTACTTC AGCCGGTTCG CGCCGTTCGA TGCGCGCGCC
GTGTCGACGC GCGGCAACAA CGTCGACCAG GTGATGCAGG ACAGCAAGGT CTTCGGCAGC
CGGCTGACCG TGACCACGCC GCTCGACAAG GATGCGCGCA CGAAGCTGCT GTGGGGCGCG
GACTTCAACC AGGAACGCAG CGACATGCCC GACGACATCT TCTCGCCGAC GGCCTATGAC
GCGAGCGGCG GCCTGGTCTA CCGGAAGATC GGCACGGTGA CCTACCTGCC GCCGCTGACC
ACGCGCAGCG TCGGCGGATT CGGCCAGCTG CAGCACAAGT TCAACGATCG CTGGTCGGCG
GAGGCCGGGG TGCGCTACGA ACACGCGAGC GCGAGCTTCG ACAGCTTCGT GCCGCTGTCG
CAATCGCGGC TGGCGCAGAA GTACACGGTG CCGGGCGGCG AGACGGGTTT CGGCGCCTGG
CTGTTCAACG CCGGCGTCAC GTACGCGCCG GTGCGCGGGC AGGAGGTCTA CGCGTCGTTC
AGCCAGGGGT TCCAGTTGCC GGATGTCGGG CTGCAGCTGC GCAACGCCAC GGCGGGCTTC
AACATCAATT CGTCGAGCCT CGAGCCCGTG AAGACCAACA ATTACGAGAT CGGCTGGCGC
GGCAATCTCG GCAGCCACGC ACGCGGGACG CTGGCGCTGT TCTACACGAC CTCGGAACTG
GGCGACGTGC AGAGCTTCAA CAACGGCCTG ATCCTGACCC GCACCGCCGA GCGGATCGCC
GGCGTGGAGG CCGGCGTCGA CTACGCGAGC GACGACGAGA AGTGGGGCGC GGGCGGCACG
GTGACCTACA TGGAGGGGCG CGAGCGTCCG CAGGGCGCGG CGAACTTCCA GAACATGACG
GGCTACCGCA TTCCGCCGCT GAAGCTGACC GGCTATCTCG AATACCGGCC GAACACGCGC
TGGAGCAATC GCCTGCAGGC GACGTTCTAC GCGGCGCGCG ACTATCGCCT GAACGGCAGG
ACGAGCTTCG GGCGGATCGA CGTGGCCAGC TACACGACGA TCGACCTGAT CTCGACCTAC
CAAGTCACCA AGAAGGACAA GGTGCGGGTG GGCATCGAGA ACCTGCTGAA CCGCTATTAC
CTGCCGCTGT ACAGCCAGCT GATGCGCAAC AGCAATAACA CCAGCCGCCT GCCCGCCGCG
GGCGCGGTCT TGACGGTGAG CTACACCCAC CGCTGGTAA
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| Protein sequence | MGHFVCVAVA GGCVSTVAWG QGATVPIDIP AQRLDRALTA LAQQSGVPIQ FADALAGQRT
AQAVQGRMAV SDALERLLAG SGLRARSTGA NTFTVEAQAQ DVPAKAAADG PEAPAVAELE
ATVVSTDRTR SDLVRPTRQV TQISHEELGD LQAGSGTLAT ALSKVVPGMA DSSHTITDYG
QTLRGRGTLV LLDGMPLNTN RDSARNLASL DPNNIERIEV LRGSSALYGS GATGGIVSIT
TRPAGGEPRA ETTVSMTSPL SHPGAAGLGG AVQQYVAGSK GPVDYEFNVG TQHVGGSYDA
RGHRIAPEPS QGDLFDSNIY SIGGKLGLRI DPNQRVVFSA SHYDAKQDTD YASDPSVARL
PAGSAVARAI NGLQLADQNR IKNTLLNLQY ENKDVFGSQV GAQFYYRDYF SRFAPFDARA
VSTRGNNVDQ VMQDSKVFGS RLTVTTPLDK DARTKLLWGA DFNQERSDMP DDIFSPTAYD
ASGGLVYRKI GTVTYLPPLT TRSVGGFGQL QHKFNDRWSA EAGVRYEHAS ASFDSFVPLS
QSRLAQKYTV PGGETGFGAW LFNAGVTYAP VRGQEVYASF SQGFQLPDVG LQLRNATAGF
NINSSSLEPV KTNNYEIGWR GNLGSHARGT LALFYTTSEL GDVQSFNNGL ILTRTAERIA
GVEAGVDYAS DDEKWGAGGT VTYMEGRERP QGAANFQNMT GYRIPPLKLT GYLEYRPNTR
WSNRLQATFY AARDYRLNGR TSFGRIDVAS YTTIDLISTY QVTKKDKVRV GIENLLNRYY
LPLYSQLMRN SNNTSRLPAA GAVLTVSYTH RW
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