| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00826 |
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| Symbol | RSp0398 |
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| ID | 1222705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 503322 |
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| End bp | 504788 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240258 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_521959 |
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| Protein GI | 17548619 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.61367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAC TGCTGATCAA CAAGCCCAAA CGGCTGATTG GCCTCGCCTT GCTGCTCTCG
CTCACCGTGA GTGCCGCCGC CATGCTGTCG CTGCACGAGA TGCGGGTCGA CGCCTTCGAG
CGTGCCAAGG ACGCCGGGGC CAACATCGCC CTGGTCATTG AGCACGACAT CACGCGCAAC
CTGGAGTTCT ACTCGCTGTC GTTGCAGAAC GTGGCGGACA GGCTGGCCGA CCCCGAAGTC
CGCCGCCTGC CCGATCATGT CCAGCGCATG GTCCTGTTCG ACGGGCGGAT CCAGGCGCAG
GATCTCGGCT CCATGCTGGT GACCGACCGC GAGGGGCGCG TGATACTCGA CTCCAAAGTC
GAACCCGCGC GCGCGCTCGA CTTCGGCGAC CGCGACTATT TCCTGCAGCA GGCCAAGAGC
GACAACCTGG GCATCTATGT CAGCAAGCCG TTCGAGGCGC GCACCGGGCT CGGCCTGGCC
ATCGCCCTCA GCCTGCGCCT GAACGATGCG GACGGCCGGT TCTCGGGGGT GGTGTCGGGC
GGCCTGCGCG TGCGCTATTT CGATCGGCTG TTCTCCGGCG TGACGCTGGG CAAGAACGGC
GCGATCGCGC TGCTGTACGC CGACGGCACC CTGGCCACGC GCCGTCCCGC GCTCACATCG
GCCACCGCCG CCGCGAAACG CAGCGAGCAC CTGGCGCTGT TCGCCAACAC CGCGGGCGGG
ACCTATCTCG ATGCCTCCGT GCGCGACGGT GTCGAGCGGC TCTACACCTA TCGGCGCATC
GGCAATTACC CGCTGTTCGT AGCGGTCGGC ACCGCGACGG AAGACATCTA CGCCAACTGG
AAAGCCCGGG CCTGGTGGAT CGGCATGCTC GTGGTGCTGT TCAACGTGGT CACGCTGGCG
ATGGCCTACC TGTTTGCCCA GCACCTGGAG CGACGGATCG AAGAACAGCG CCGGCATGCC
GAGCTCGCGG CCACCGACGC CCTCACCGGC CTGGCCAACC GGCGCGCGCT GGACGAGCGC
CTGGACGCGG AGTGGCGCCG CGCCGCGCGC GAGCGGCAGC CGCTGTCCGT GCTGATGATC
GATGTGGACC ACTTCAAGGC CTACAACGAC CACTACGGCC ACCCCGACGG CGACGCCGCC
CTCCAGGCGG TTGCGCGCTG CATCCAGGCC AACCTGCGCC GACCCGGCGA CCTCGCCGCG
CGCTACGGCG GCGAAGAGTT CTGCGTCGTG CTGCCGGGCA GCGATCTCGA CAGCGCAAAC
GTTGTCGCGG AAACCATCCG CCGCGCCATC CTGGTGCTCA ACATTCCGCA TGCGCGGAGT
GCATCCACTG CCCTGACCGT CAGCATCGGC GCGGCGTCCG GCACGCCGGC ATCGTCGGGC
GAGCCGCGTG CGGCGACCCT GACCAAGGCG GCGGATGCGC AGTTGTATCG GGCGAAGACG
TCGGGGCGGA ATCGGACGAT GCCGTAG
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| Protein sequence | MLKLLINKPK RLIGLALLLS LTVSAAAMLS LHEMRVDAFE RAKDAGANIA LVIEHDITRN
LEFYSLSLQN VADRLADPEV RRLPDHVQRM VLFDGRIQAQ DLGSMLVTDR EGRVILDSKV
EPARALDFGD RDYFLQQAKS DNLGIYVSKP FEARTGLGLA IALSLRLNDA DGRFSGVVSG
GLRVRYFDRL FSGVTLGKNG AIALLYADGT LATRRPALTS ATAAAKRSEH LALFANTAGG
TYLDASVRDG VERLYTYRRI GNYPLFVAVG TATEDIYANW KARAWWIGML VVLFNVVTLA
MAYLFAQHLE RRIEEQRRHA ELAATDALTG LANRRALDER LDAEWRRAAR ERQPLSVLMI
DVDHFKAYND HYGHPDGDAA LQAVARCIQA NLRRPGDLAA RYGGEEFCVV LPGSDLDSAN
VVAETIRRAI LVLNIPHARS ASTALTVSIG AASGTPASSG EPRAATLTKA ADAQLYRAKT
SGRNRTMP
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