Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00415 |
Symbol | RSp0535 |
ID | 1222842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 669068 |
End bp | 669979 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637240395 |
Product | transcription regulator protein |
Protein accession | NP_522096 |
Protein GI | 17548756 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCA GCCCGCTTCC CCCTCTCCAA TGCCTGATCG CATTCGAGTC GGCCGCAAGA CATTCCAGCT TCACGCGCGC GGCAGCCGAG CTCAATCTCA CGCAAAGCGC CGTCAGCCGG CAAATCGGGC AGCTGGAAGA TTTTCTCGGG CGCCAGTTGT TCCTGCGCGA GCCGCGCGCC TTGCAGCTGA CGGTCGCGGG CCAGCGCTAT GCGGATCGCG TGCGGTCGCA ACTGGAAGCG TGCTCCGATG CCACCTTCGA TGTGATGAAG CGATATGGCG ATCTCGATCT CGCCCTCGCC TGCTCGTCCG GCGTCGCCAC GCTTTGGCTG GCACCGCGCA TCGGCCATTT TTACGCCAGC CATCCCAATA TCAACCTGCG CATCATCGTT CGCGACAGCC TCGCGTCGCT CGCGCCGTCC GAGTTCGACG TGGGGCTGTA TTACCTGCGC GACGCATGCG GGCCGCAGTT CAACGCCCAG CCGTTGATCG ATGAGGAGGT CTTTCCCGTG TGCTCGCCGG ACTATCTCGG CGGGAGGCTC GTGACGCCGG CGGAGCTTGC GCATCAAACG CTGCTGATGC AGGACGACCG GCAGCTGACC TGGATGTCGT GGGAGGAATG GTTGGGCCTG AACGGTGTCG GGATGCCGAA GAAGCCCCGG GCCATTGTCT CGAACCACTA TCCGCAACTG GTGCAGATGG CGCTTCACGG CCACGGCGTT TTACTCGGCT GGCGCCAGAT CATCGATTGC CACCTCGAAA CAAAAGCGCT GGTGCGCGCG ACCAGCGAAA CCGCGACATT CGGCGGTGGT TACCACATCA TCACGCCGGA TGAGCATTCC ATGAATCGGG CGGCGACCAT GTTTGCGAGC TGGTTGCTTG AGCAATCCGT TTCAATGAAT GCATTTGCAT AG
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Protein sequence | MRISPLPPLQ CLIAFESAAR HSSFTRAAAE LNLTQSAVSR QIGQLEDFLG RQLFLREPRA LQLTVAGQRY ADRVRSQLEA CSDATFDVMK RYGDLDLALA CSSGVATLWL APRIGHFYAS HPNINLRIIV RDSLASLAPS EFDVGLYYLR DACGPQFNAQ PLIDEEVFPV CSPDYLGGRL VTPAELAHQT LLMQDDRQLT WMSWEEWLGL NGVGMPKKPR AIVSNHYPQL VQMALHGHGV LLGWRQIIDC HLETKALVRA TSETATFGGG YHIITPDEHS MNRAATMFAS WLLEQSVSMN AFA
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