Gene RS00415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS00415 
SymbolRSp0535 
ID1222842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp669068 
End bp669979 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content62% 
IMG OID637240395 
Producttranscription regulator protein 
Protein accessionNP_522096 
Protein GI17548756 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCA GCCCGCTTCC CCCTCTCCAA TGCCTGATCG CATTCGAGTC GGCCGCAAGA 
CATTCCAGCT TCACGCGCGC GGCAGCCGAG CTCAATCTCA CGCAAAGCGC CGTCAGCCGG
CAAATCGGGC AGCTGGAAGA TTTTCTCGGG CGCCAGTTGT TCCTGCGCGA GCCGCGCGCC
TTGCAGCTGA CGGTCGCGGG CCAGCGCTAT GCGGATCGCG TGCGGTCGCA ACTGGAAGCG
TGCTCCGATG CCACCTTCGA TGTGATGAAG CGATATGGCG ATCTCGATCT CGCCCTCGCC
TGCTCGTCCG GCGTCGCCAC GCTTTGGCTG GCACCGCGCA TCGGCCATTT TTACGCCAGC
CATCCCAATA TCAACCTGCG CATCATCGTT CGCGACAGCC TCGCGTCGCT CGCGCCGTCC
GAGTTCGACG TGGGGCTGTA TTACCTGCGC GACGCATGCG GGCCGCAGTT CAACGCCCAG
CCGTTGATCG ATGAGGAGGT CTTTCCCGTG TGCTCGCCGG ACTATCTCGG CGGGAGGCTC
GTGACGCCGG CGGAGCTTGC GCATCAAACG CTGCTGATGC AGGACGACCG GCAGCTGACC
TGGATGTCGT GGGAGGAATG GTTGGGCCTG AACGGTGTCG GGATGCCGAA GAAGCCCCGG
GCCATTGTCT CGAACCACTA TCCGCAACTG GTGCAGATGG CGCTTCACGG CCACGGCGTT
TTACTCGGCT GGCGCCAGAT CATCGATTGC CACCTCGAAA CAAAAGCGCT GGTGCGCGCG
ACCAGCGAAA CCGCGACATT CGGCGGTGGT TACCACATCA TCACGCCGGA TGAGCATTCC
ATGAATCGGG CGGCGACCAT GTTTGCGAGC TGGTTGCTTG AGCAATCCGT TTCAATGAAT
GCATTTGCAT AG
 
Protein sequence
MRISPLPPLQ CLIAFESAAR HSSFTRAAAE LNLTQSAVSR QIGQLEDFLG RQLFLREPRA 
LQLTVAGQRY ADRVRSQLEA CSDATFDVMK RYGDLDLALA CSSGVATLWL APRIGHFYAS
HPNINLRIIV RDSLASLAPS EFDVGLYYLR DACGPQFNAQ PLIDEEVFPV CSPDYLGGRL
VTPAELAHQT LLMQDDRQLT WMSWEEWLGL NGVGMPKKPR AIVSNHYPQL VQMALHGHGV
LLGWRQIIDC HLETKALVRA TSETATFGGG YHIITPDEHS MNRAATMFAS WLLEQSVSMN
AFA