| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00409 |
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| Symbol | RSp0530 |
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| ID | 1222837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 660723 |
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| End bp | 663872 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240390 |
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| Product | putative cation efflux system transmembrane protein |
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| Protein accession | NP_522091 |
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| Protein GI | 17548751 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0305789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACG CATTGATACG CGGCGCGCTC AAGCAGCGGC TGGTGGTGGC CGTGGTGGCC
GCCGTGCTGC TGTTCTTCGG CATCGACGCC GCCCGCAAGC TGTCGCTGGA TGCGTTTCCG
GACGTGACCA ACGTGCAGGT GCAGATCGCC ACCGAGGCGC CCGGGCGCTC GCCCGAGGAG
GTCGAGCGCT TCGTCACCGT GCCGGTGGAG ATGGCGATGA CCGGCCTGCC GGCGCTGACC
GAGATGCGCT CGCTGAACAA GCCCGGCCTG TCGCTGATCA CGCTGGTGTT CAGCGACGAG
ACCGACGTGT ACTTCGCGCG CCAGCTGGTG ATGGAGCGCA TCATCGAAGT GCAGTCGCGC
ATGCCGGTGG GCGTGACGCC GGTGCTGGGG CCGGTGTCCA CGGGGCTGGG CGAGGTCTAC
CAGTACACGC TCGATCGTCC GGACGACGGC AGCCGGGAAC TGTCGGCCGA CGAGCTGACC
CGCCGCCGCA TCGCCCAGGA CTGGGTGGTG CGGCCGCTGC TGCGCTCCAT TCCGGGCGTG
GCGGAGATCA ACTCGCAGGG CGGCTACGAG AAGCAATACC AGGTGCTGGT CAATCCCGAG
CGGCTGCGCC ACCACAACGT GACGGTGCAG CAGGTGTTCG AGGCGCTGGC CGCCAACAAC
GCCAACTCGG GCGGCGGCGT GCTGCCGCAT TTTGCCGAGC AGTACCTGAT CCGCGGCGTG
GGCCTGGTGC GCGACATCAA CGACATCGGC GCCATCGTGC TCAAGGAAGT GGGCGGCACG
CCGCTGACCC TGCGCGACGT GGCCGAGGTG AAGATCGGCA CGGCGGCGCG CGCGGGGGCG
GTGGTCAAGA ACGGCGTGAC CGAATCGGTC GGCGGCGTGG TCATGATGAT GCGCGGCGGC
AACGCCAAGG AAGTCGTCGC GCGCATCCAG GCGCGCGTCA AGGCCATCAA CGACAACGGC
ATGCTGCCCG ACGGCCTGAA GATCGTGCCG TATTACGAGC GCTCCGAGCT GGTCGATGCG
GCGCTCGACA CGGTGGTCAA GGTGCTGCTC GAGGGCGTGG TGCTGGTGGT GCTGGTGCTG
CTGCTGTTCC TGGGCGACAT CCGGTCTTCG CTGATCGTGG TCGGCACGCT GGTGCTGACG
CCGCTGCTGA CCTTCATGGC GATGAACCGG CTGGGCATCT CGGCCAACCT GATGTCGCTG
GGCGGGCTGG CGATCGCCAT CGGCCTGATG GTGGACGGCT CGGTGGTGGT GGTCGAGAAC
GCGTTCGCGC ATCTGGCCAA GCCGCGCGAC CCGAACGAGA GCCGCGTGCG CGTCATCCTG
CATGCCGTGA CGGAGGTGGC CACGCCGGTG ATCTTCGGGG TGGGCATCAT CATCCTGGTG
TTCCTGCCGC TGATGACGCT GCAGGGCATG GAGGGCAAGA TGTTCGCGCC GCTGGCGTTC
ACCATCGCGA TCGCGCTGTT CATCTCGCTG GTGCTGTCGC TGACGCTGAC GCCGGTGCTG
TCGTCGTACC TGCTCAAGCC CAAAGCGTCG AAACATGCCG GGGGCGATCA CGCAGACGAC
GCGCATGCGC AGCACGATGC GCACGACACC TGGCTGATCC GCAAGCTCAA GAAGCCGTAC
CTGCGCCTGC TGGAGCTGAG CCTGAACAAC GGCCGCAAGA CCGTGGCGGT GGCCGTGGCG
GTGTTCTTCG CCACCGGCGC GCTGATGCCC TTTCTGGGCA CGGCGTTCAT CCCCGAGATG
AAGGAGGGCT CGATCGTGCC GGGCATCAAC CGCGCGCCCA ACATCTCGCT GGAAGAATCG
GTCCGCATGG AGATGGAGGC GATGCGCCTG GTGATGCAGG TGCCGGGCGT GAGGTCGGCG
GTGTCGGGCG TGGGCCGGGG CGAGTCGCCG GCCGACCCGC AGGGCCAGAA CGAATCGACG
CCGATCGTCT CGCTCAAGCC GCGCGACCAG TGGCCGAAGG GCTGGACCCA GGACGACATC
GCCGAGGCCA TGCGCCGCGC GCTGCAGGCG CTGCCCGGTG TGCAGATCGT GATGGCCCAG
CCGATCTCCG ACCGGGTCGA CGAGATGGTC ACCGGCGTGC GCTCGGACGT CGCCATCAAG
GTGTTTGGCG ACGACCTCGC CGTGCTGCGC GAGAAGGCCG AGGCCATCGC GCGCGTGGCG
CAGGGCATCC AGGGGGCGCA GGACATGCGG GTCGAGCGCA TCACCGGCCA GCAGTACCTG
CAGATCGCCA TCGACCGGCA GGCCATCGCG CGCCACGGCC TGAACGCGTC CGACGTGCAC
AACGTGATCG AGACCGCCAT CGGCGGCAAG GAAGCCACCG AGATCTTCGA GGGCGAGCGC
CGCTTCGGCG CGGTGGTGCG TCTGCCCGAG GCGTACCGCG GCAGCGTGGA GGCGATCCGC
AACCTGATCG TCGCCGCGCC CAACGGCGCG CAGGTGCCGC TGGAGAGCCT CGCGCGCATC
GAGGTGACCG ACGGCCCCGC GCAGATCAGC CGCGAGCTCG GCAAGCGCCG CGTGGTGGTG
GGCGTGAACG TGCGCGACCG CGACCTGGGC GGCTTCGTGG CCGAGCTGCA GGCCGCCGTG
GCGCAGAAGG TCAAGCTGCC GGAAGGCTAC TACCTGGAGT GGGGCGGCCA GTTCCAGAAC
ATGGAGCGCG CGATGGGGCA CCTGAAGGTG ATCGTGCCGA TCACGGTGGC GGCGATCTTC
TTCCTGCTGT TCCTGCTGTT CAACTCGGTG CGCTACGCCA CGCTGATCAT TCTGGTGCTG
CCGTTCGCCT CGGTGGGCGG GATCCTCGGG CTGTTCGTCA CCGGCGAGTA CCTGTCGGTG
CCGGCTTCGG TGGGCTTCGT GGCGCTGTGG GGCATCGCGG TGCTCAACGG CGTGGTGCTG
GTCAGCACGA TCCGCAGCCT GCGCGAGCAG GGCATGTCGG TCGACGAGTC CGTGCGGCTG
GGTGCGCGTC TGCGCTTTCG CCCGGTGATG ATGACGGCTA CTGTTGCCAT GTTGGGCCTG
ATTCCGTTCC TGTTTGCCAC CGGCCCGGGC TCCGAGGTGC AGCGCCCGCT GGCCATCGTC
GTCATCGGCG GCTTGCTGAC ATGCACGCTG CTGACGCTGG TGATGCTGCC CACGCTCTAT
AAATGGTTCG ATGAGGAGGC CAGATCGTGA
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| Protein sequence | MIDALIRGAL KQRLVVAVVA AVLLFFGIDA ARKLSLDAFP DVTNVQVQIA TEAPGRSPEE
VERFVTVPVE MAMTGLPALT EMRSLNKPGL SLITLVFSDE TDVYFARQLV MERIIEVQSR
MPVGVTPVLG PVSTGLGEVY QYTLDRPDDG SRELSADELT RRRIAQDWVV RPLLRSIPGV
AEINSQGGYE KQYQVLVNPE RLRHHNVTVQ QVFEALAANN ANSGGGVLPH FAEQYLIRGV
GLVRDINDIG AIVLKEVGGT PLTLRDVAEV KIGTAARAGA VVKNGVTESV GGVVMMMRGG
NAKEVVARIQ ARVKAINDNG MLPDGLKIVP YYERSELVDA ALDTVVKVLL EGVVLVVLVL
LLFLGDIRSS LIVVGTLVLT PLLTFMAMNR LGISANLMSL GGLAIAIGLM VDGSVVVVEN
AFAHLAKPRD PNESRVRVIL HAVTEVATPV IFGVGIIILV FLPLMTLQGM EGKMFAPLAF
TIAIALFISL VLSLTLTPVL SSYLLKPKAS KHAGGDHADD AHAQHDAHDT WLIRKLKKPY
LRLLELSLNN GRKTVAVAVA VFFATGALMP FLGTAFIPEM KEGSIVPGIN RAPNISLEES
VRMEMEAMRL VMQVPGVRSA VSGVGRGESP ADPQGQNEST PIVSLKPRDQ WPKGWTQDDI
AEAMRRALQA LPGVQIVMAQ PISDRVDEMV TGVRSDVAIK VFGDDLAVLR EKAEAIARVA
QGIQGAQDMR VERITGQQYL QIAIDRQAIA RHGLNASDVH NVIETAIGGK EATEIFEGER
RFGAVVRLPE AYRGSVEAIR NLIVAAPNGA QVPLESLARI EVTDGPAQIS RELGKRRVVV
GVNVRDRDLG GFVAELQAAV AQKVKLPEGY YLEWGGQFQN MERAMGHLKV IVPITVAAIF
FLLFLLFNSV RYATLIILVL PFASVGGILG LFVTGEYLSV PASVGFVALW GIAVLNGVVL
VSTIRSLREQ GMSVDESVRL GARLRFRPVM MTATVAMLGL IPFLFATGPG SEVQRPLAIV
VIGGLLTCTL LTLVMLPTLY KWFDEEARS
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