| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00408 |
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| Symbol | RSp0529 |
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| ID | 1222836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 659692 |
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| End bp | 660726 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637240389 |
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| Product | putative cation efflux protein |
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| Protein accession | NP_522090 |
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| Protein GI | 17548750 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000967818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGTCG CCCCGCCCGC GCTGACCGCG CGCCTGAAGG TGGCGCCCGC GGGGCAGCAG
GCGGTTTCCG AGCGCCTGCG CGTGCCGGGG CAGATCGACT TCGACGAGCA GCGCCTCGCC
CGCATCGGCG CATCCGTGAC GGGCCGCGTG ACCGAGCTGC TCGTGGTGCC GGGCCAGCAG
GTCAAGGCCG GCGACATCCT GGCGCAGCTG CACAGCACCG AGCTCGGCAC CGCGCAGCTC
GCCTACCAGA AGGCCGTCGC GCAGCGCGAC CTGCAGGCCC GGGCGCTGGA GCGCGCCAAG
CTGCTGCTGG CGGCCGACGT GATCGGCTCG GCCGAGCTGC AGAAGCGTCA GAGCGAGCTG
GCCATGGCGC AAGCCGAAGT GCGCGCCGCG GTGGATCAGT TGCGCGTGAT GGGCGTGTCG
CCCGCCACGC TCGCCAAGAT GCGCACCGGC GGCATGTCTT CGATCTCGCC GGTGGTGGCG
AGCCTGGGCG GCACGGTGGT GGAGCGCAAG GTGACGCGCG GCCAGGTGGT GCAGCCGGCC
GATGCGCTGT TCACCGTGGC GGATCTGTCG CGCGTGTGGG TGGTGGGGCA GGTGCCCGAG
AGCGCCGCGC CGCTGGTGCG TGCCGGTCAG GCGGTGGAGA TCGAGACCGG CGCGCCGGGC
GGGCGCATCG TCGGCAAGCT GATCTGGGTG TCGGACATCG TCGATCCGCA GACGCGCACG
GTGACGGTCC GCACCGAGGT CGACAACCCC GAGCGCGCGC TCAAGCCGTC GATGCTGGCG
ACGCTGCTGA TCGAGTCGCG CCCCGAGCAG AAGCTGGTGG TGCCGACCGC GGCCGTGGTG
CGCGAAGACA ACCGCGACTA CGTGTTCGTG CAGGTCAGCC AGACCGACTA TCGGCTGGTG
CCGGTGAAGC TGGGCGACGA GTCGAACGGC GTGCGGCCGG TGGCCTCGGG CCTGCAGGCC
GGGCAGCCCA TCGTCGTCGA GGGCGGCTTC CACCTCAACA ATGAGCGCAA GCGCGCCGAG
ATGGAGGGCG CATGA
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| Protein sequence | MVVAPPALTA RLKVAPAGQQ AVSERLRVPG QIDFDEQRLA RIGASVTGRV TELLVVPGQQ
VKAGDILAQL HSTELGTAQL AYQKAVAQRD LQARALERAK LLLAADVIGS AELQKRQSEL
AMAQAEVRAA VDQLRVMGVS PATLAKMRTG GMSSISPVVA SLGGTVVERK VTRGQVVQPA
DALFTVADLS RVWVVGQVPE SAAPLVRAGQ AVEIETGAPG GRIVGKLIWV SDIVDPQTRT
VTVRTEVDNP ERALKPSMLA TLLIESRPEQ KLVVPTAAVV REDNRDYVFV QVSQTDYRLV
PVKLGDESNG VRPVASGLQA GQPIVVEGGF HLNNERKRAE MEGA
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