Gene RS00392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS00392 
SymbolRSp0514 
ID1222821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp639437 
End bp640570 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID637240374 
Producthypothetical protein 
Protein accessionNP_522075 
Protein GI17548735 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.65965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGGC TCAACACCCA CACGTTCCTG CGCGTGCCCG CGCGAGACTG GGCAGCATCG 
GCCGCGACCG TCGTCGTTGC CTACCTGGTG CTGTGGAACC TGCTGCGGCT GATCGTCAAC
CGGCTGGAGG CGCGCGCGCG GCGCAACGGC ACGCGCTTCG ATGCCATGGC CGGGGCGGTA
CTGCACGACA CGCATCCGCT GTTCGTCGGG CTGGCGGCGC TGCTGGCCGG GTCTTACTTC
ATTGACCTGC CGGCGCGCAT CGTCGGCAAG CTCGATCACA TCTGGTTCGT CATCATCGGA
TTCCAGATCG CGCTGTGGCT CAACCGCGGC GTCAAGCTGT GGACGCGCGA GAAGCTGGCG
GCGCAGGACC ACGCGACGCG CAACCCGGTC ATCACGTCGA TGATGGCGTG GGTGCTGCGC
TTTGTGCTGT GGTCGGTGCT GCTGCTGGCG ATCCTGGCCA ACGTGGGGAT CAACGTCACG
ACCTTCGTCG CCAGCCTGGG CGTGGGCGGC GTGGCGGTGG CGCTGGCGGT GCAGAGCATC
CTGAGCGACC TGTTCGCGTC GCTGGCGATC GGGCTGGACA AGCCGTTCGA GATCGGCGAC
TTCATCGTCT TCGAATCGAT CGCGGGGACG GTGCAGCACG TCGGGCTGAA GACCACGCGC
ATCCGCAGCC TCTCGGGCGA GGAGATCGTC ACCTCCAACA CCGCGCTGCT CAAGAGCACC
ATCCACAATT ACAAACGGAT GTCGGAACGG CGCATCGTCT TCACCTTCGG CGTGACCTAC
GATGCGCAGG CCGCGCAGCT GCGGCAGATT CCGGACATCA TCCGCCGTGC GGTGGAGAGC
ACCGGCAACA CGCGCTTCGA TCGCGCGCAC TTCAAGGAGT TCGGCGAGAA CGCGCTGACC
TTCGAGACGG TGTACTTCGT CACCGATCCG GATTTCAACC TCTACATGGA CATCCAGCAG
CGCATCAACC TGGCGATCCT GGACGGCCTG CAGAAGCTGG GCACCGCCTT CGCCCTGCCG
ACGCGCACCA TCCGCGTGGA GCGCGCCGGC GACGACGCCG ACCTGCCGGG CACCGGTGCC
CTGCGCGGCG GCGCCCAGCA CGGCAACAGC ATGCCGCCGC GCGCTAACGC GTGA
 
Protein sequence
MEWLNTHTFL RVPARDWAAS AATVVVAYLV LWNLLRLIVN RLEARARRNG TRFDAMAGAV 
LHDTHPLFVG LAALLAGSYF IDLPARIVGK LDHIWFVIIG FQIALWLNRG VKLWTREKLA
AQDHATRNPV ITSMMAWVLR FVLWSVLLLA ILANVGINVT TFVASLGVGG VAVALAVQSI
LSDLFASLAI GLDKPFEIGD FIVFESIAGT VQHVGLKTTR IRSLSGEEIV TSNTALLKST
IHNYKRMSER RIVFTFGVTY DAQAAQLRQI PDIIRRAVES TGNTRFDRAH FKEFGENALT
FETVYFVTDP DFNLYMDIQQ RINLAILDGL QKLGTAFALP TRTIRVERAG DDADLPGTGA
LRGGAQHGNS MPPRANA