Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00392 |
Symbol | RSp0514 |
ID | 1222821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 639437 |
End bp | 640570 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240374 |
Product | hypothetical protein |
Protein accession | NP_522075 |
Protein GI | 17548735 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.65965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTGGC TCAACACCCA CACGTTCCTG CGCGTGCCCG CGCGAGACTG GGCAGCATCG GCCGCGACCG TCGTCGTTGC CTACCTGGTG CTGTGGAACC TGCTGCGGCT GATCGTCAAC CGGCTGGAGG CGCGCGCGCG GCGCAACGGC ACGCGCTTCG ATGCCATGGC CGGGGCGGTA CTGCACGACA CGCATCCGCT GTTCGTCGGG CTGGCGGCGC TGCTGGCCGG GTCTTACTTC ATTGACCTGC CGGCGCGCAT CGTCGGCAAG CTCGATCACA TCTGGTTCGT CATCATCGGA TTCCAGATCG CGCTGTGGCT CAACCGCGGC GTCAAGCTGT GGACGCGCGA GAAGCTGGCG GCGCAGGACC ACGCGACGCG CAACCCGGTC ATCACGTCGA TGATGGCGTG GGTGCTGCGC TTTGTGCTGT GGTCGGTGCT GCTGCTGGCG ATCCTGGCCA ACGTGGGGAT CAACGTCACG ACCTTCGTCG CCAGCCTGGG CGTGGGCGGC GTGGCGGTGG CGCTGGCGGT GCAGAGCATC CTGAGCGACC TGTTCGCGTC GCTGGCGATC GGGCTGGACA AGCCGTTCGA GATCGGCGAC TTCATCGTCT TCGAATCGAT CGCGGGGACG GTGCAGCACG TCGGGCTGAA GACCACGCGC ATCCGCAGCC TCTCGGGCGA GGAGATCGTC ACCTCCAACA CCGCGCTGCT CAAGAGCACC ATCCACAATT ACAAACGGAT GTCGGAACGG CGCATCGTCT TCACCTTCGG CGTGACCTAC GATGCGCAGG CCGCGCAGCT GCGGCAGATT CCGGACATCA TCCGCCGTGC GGTGGAGAGC ACCGGCAACA CGCGCTTCGA TCGCGCGCAC TTCAAGGAGT TCGGCGAGAA CGCGCTGACC TTCGAGACGG TGTACTTCGT CACCGATCCG GATTTCAACC TCTACATGGA CATCCAGCAG CGCATCAACC TGGCGATCCT GGACGGCCTG CAGAAGCTGG GCACCGCCTT CGCCCTGCCG ACGCGCACCA TCCGCGTGGA GCGCGCCGGC GACGACGCCG ACCTGCCGGG CACCGGTGCC CTGCGCGGCG GCGCCCAGCA CGGCAACAGC ATGCCGCCGC GCGCTAACGC GTGA
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Protein sequence | MEWLNTHTFL RVPARDWAAS AATVVVAYLV LWNLLRLIVN RLEARARRNG TRFDAMAGAV LHDTHPLFVG LAALLAGSYF IDLPARIVGK LDHIWFVIIG FQIALWLNRG VKLWTREKLA AQDHATRNPV ITSMMAWVLR FVLWSVLLLA ILANVGINVT TFVASLGVGG VAVALAVQSI LSDLFASLAI GLDKPFEIGD FIVFESIAGT VQHVGLKTTR IRSLSGEEIV TSNTALLKST IHNYKRMSER RIVFTFGVTY DAQAAQLRQI PDIIRRAVES TGNTRFDRAH FKEFGENALT FETVYFVTDP DFNLYMDIQQ RINLAILDGL QKLGTAFALP TRTIRVERAG DDADLPGTGA LRGGAQHGNS MPPRANA
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