Gene RS00348 details

Gene Information

• Locus tag: RS00348
• Symbol: RSp0470
• ID: 1222777
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: -
• Start bp: 585757
• End bp: 586143
• Gene Length: 387 bp
• Protein Length: 128 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637240330
• Product: general secretion pathway GSPG-like transmembrane protein
• Protein accession: NP_522031
• Protein GI: 17548691
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTGACCA CCCGACGCAC CCTCCAGCGT GGATTCACGC TGATCGAGCT GATGGTCGTC 
ATGGCCGTCA TCGCCCTGCT GACCACCATC GCGCTGCCGC AGTATTTCAA GCACGTGGAT 
ACCGCCAAGG AACGCGTGCT GCGCGCGAAC CTGGAAACGA CACGCGACGC CATCGACAAG 
TTCTATGCCG ACCGCAACCA GTATCCGGCG TCGCTGGCGG AGCTGGTCAC GCAGCGCTAT 
CTGAAGGCGC TGCCGAAAGA CCCGATCACC GATCGCACCG ACAGCTGGAA GCTCCTACCC 
TCGCCCAACG GCGAGCCGGG CGTCTACGAC CTGCGCAGCA CGGCGCCGGG CAAATCCATG 
GATGGAACTC CGTATGCGGA CTGGTAA 

 

Protein sequence

MVTTRRTLQR GFTLIELMVV MAVIALLTTI ALPQYFKHVD TAKERVLRAN LETTRDAIDK 
FYADRNQYPA SLAELVTQRY LKALPKDPIT DRTDSWKLLP SPNGEPGVYD LRSTAPGKSM 
DGTPYADW