Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3442 |
Symbol | dnaA |
ID | 1222306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3714708 |
End bp | 3716276 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239859 |
Product | chromosomal replication initiation protein |
Protein accession | NP_521561 |
Protein GI | 17548159 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.807856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.719643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATT TTTGGCATGC GGCGTCCGCC CAGCTCGAGA GCGAGCTGAC TCCGCAACAA TTCAAGACGT GGATCAAGCC GCTGACGCCG CTGTCATTCG ACGAGCAGGC GTGCATGCTG CGGATTGCCG CGCCTAACCG TTTCAAGCTC GACTGGGTCA AGAGCCAGTT TTCGGGCCGC ATTCAGTCGC TCGCGTGCGA CTACTGGGAG ATGCAGGTCG ACGTGCAGTT CGTGCTCGAC CCGACCGCCG GCCAGCGCCA GGCCGCCATG CAGCCGGCAC TGGCCCCGAT GCCGATGCAG CCGCTGGCTG CGCAAACGAT GCAGGCCCAG GCTGTGCCGC GCGAAGCGCC GGCCCGCCCC ACAATGGCGC CCTACCGCGA AACCCCGATG GCCACGGCCG CCCATGCGGC GGCCGACATC GACGTGCCCG TCATGGACGC CGCCGAGGCC AGCACCCAGT CGTACCGCGT GCCGGCACCG GCCGCACCCG CCGTGATGGG TGGCCTGAGC GCACCGCCCG CCGCCCCGGT GGATGACACC GTGCACGAGC GCTCACGGCT GAACCCCATC CTCACCTTCG ACAACCTCGT CACCGGCAAG GCCAACCAGT TGGCGCGCGC GGCCGCCGTG CAGGTCGCCA ACAACCCGGG CAAGTCGTAC AACCCGCTGT ACCTGTACGG CGGGGTGGGG CTGGGCAAGA CCCACTTGAT CCATGCCATC GGCAACTTCA TGCTGATGGA GAACCCGCGC GCGCGTATCC GCTACATCCA CGCAGAACAG TACGTTTCCG ACGTAGTGAA GGCTTACCAG CGCAAGGCGT TCGACGACTT CAAGCGCTAC TACCACTCGC TGGACCTGCT GCTGATCGAC GACATCCAGT TCTTCTCGGG CAAGAACCGC ACGCAGGAAG AATTCTTCTA TGCGTTCGAG GCGCTGATCG CCAACCGCGC GCAGGTCATC ATCACCAGCG ACACGTACCC GAAGGAGATC ACCGGCATCG ATGACCGGCT GATCTCGCGC TTCGACTCCG GCCTGACGGT GGCCATCGAG CCGCCCGAGC TGGAGATGCG CGTCGCCATC CTGATGAAGA AGGCGCAGGC CGAGAACGTG ACGGTGCCGG AGGAGGTGGC CTTCTTCGTG GCCAAGCACC TGCGCTCGAA CGTGCGCGAG CTGGAAGGCG CGCTGCGCAA GATCCTGGCG TACTCGAACT TCCACGGCAA GGAGATCACC ATCGAGGTCA CGCGCGAGGC GCTCAAGGAT CTGCTCACGG TGCAGAACCG GCAGATCTCG GTGGAGAACA TCCAGAAGAC CTGCGCGGAC TTCTACAACA TCAAGGTCGC CGACATGTAT TCCAAGAAGC GGCCGGCCAA CATCGCGCGC CCGCGCCAGA TCGCCATGTA CCTGGCCAAG GAGCTGACGC AGAAGAGCCT GCCGGAGATC GGCGAGCTGT TCGGCGGACG CGACCACACC ACGGTGCTGC ACGCGGTACG CAAGATCGCC GACGAGCGCA GCAAGGACGC CCAGCTCAAC CACGAGCTGC ACGTGCTGGA GCAGACGCTG AAGGGCTGA
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Protein sequence | MQDFWHAASA QLESELTPQQ FKTWIKPLTP LSFDEQACML RIAAPNRFKL DWVKSQFSGR IQSLACDYWE MQVDVQFVLD PTAGQRQAAM QPALAPMPMQ PLAAQTMQAQ AVPREAPARP TMAPYRETPM ATAAHAAADI DVPVMDAAEA STQSYRVPAP AAPAVMGGLS APPAAPVDDT VHERSRLNPI LTFDNLVTGK ANQLARAAAV QVANNPGKSY NPLYLYGGVG LGKTHLIHAI GNFMLMENPR ARIRYIHAEQ YVSDVVKAYQ RKAFDDFKRY YHSLDLLLID DIQFFSGKNR TQEEFFYAFE ALIANRAQVI ITSDTYPKEI TGIDDRLISR FDSGLTVAIE PPELEMRVAI LMKKAQAENV TVPEEVAFFV AKHLRSNVRE LEGALRKILA YSNFHGKEIT IEVTREALKD LLTVQNRQIS VENIQKTCAD FYNIKVADMY SKKRPANIAR PRQIAMYLAK ELTQKSLPEI GELFGGRDHT TVLHAVRKIA DERSKDAQLN HELHVLEQTL KG
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