Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3441 |
Symbol | dnaN |
ID | 1222305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3713315 |
End bp | 3714430 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637239858 |
Product | DNA polymerase III subunit beta |
Protein accession | NP_521560 |
Protein GI | 17548158 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.325472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.470058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGG TCAAAACCTC GCGAGACAAC CTGCTGCGTC CGCTGCAAAT CGTGAGCGGC ATCGTGGAGC GCCGCCACAC GTTGCCCATC CTGGCCAACC TGCTGATCCG CAAGAACGGT GAACGGGTCT CCTTCCTGTC CACCGACATC GAAATCCAGA TCACCACGCA CGCCGATTGC GGCGCCGGCA ACGGCGACAT CGCCACCACG GTGGCCGCGC GCAAGCTGGT CGACATCCTG CGCGCGATGC CCGATGGCGA AGTCGCGCTC ACGCTCAACG ACAAGCGCAT GAGCGTGCAG TCCGGCAAGA GCCGCTTCGC GCTGCAGACG CTGGCCGCCG AAGAATTCCC CACCGTGGCC GAGGCCAACG ACTTCGGCGC GCGCATCACG CTGCCGCAGA AGACGCTCAA GCACCTGCTG GCGATGGTGC ACTTCGCGAT GGCCCAGCAG GACATCCGCT ACTACCTGAA CGGCATGCTG CTGGTGGTGG ACGGCAAGCA GGTGATGGCC GTGGCCACCG ACGGCCACCG CCTGGCGTAC TGCGGCGTGG AGACGGGCGA GCAGCCCGCC GGCGCGGGCG GGCGCCACGA GGTCATCATC CCGCGCAAGA CCATTCTCGA GCTCCAGCGC CTGCTGGAAG ACGTGGACGA TCCCGTCTCG GTGCAGCTGG CCTCGAACCA GGTCAAGTTC ACCTTCGGCA ACATCGAGCT GATCTCCAAG CTGGTCGAGG GCAAGTTCCC GGATTTCCAG CGCGTGATCC CCAAGGGTTA CCGCAACAGC TTCACGATCG ACCGCGCGTT CCTGCAGCAG GCGCTGCAGC GCACGGCCAT CCTGACCACC GACAAGTTCA AGGGCGTGCG CTGCATGCTC GACACCAACG TCCTGAAGAT CAGCTCCACC AACGCTGACC AGGAAGAAGC GCAGGAAGAA CTCGAAATCG ACTACCAGGG CGACGCGCTG GATATCGGCT TCAACGTCAC CTACCTGCTG GACGTGCTGG CCAACCTCAA GGCCGAAAAG GTGCAGGTGA GCCTGGGCGA CTCCAACTCG AGCGCGCTCA TCACCCTGCC GGACGACGAC ACCTTCAAGT ACGTCGTCAT GCCGATGCGG ATTTGA
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Protein sequence | MQLVKTSRDN LLRPLQIVSG IVERRHTLPI LANLLIRKNG ERVSFLSTDI EIQITTHADC GAGNGDIATT VAARKLVDIL RAMPDGEVAL TLNDKRMSVQ SGKSRFALQT LAAEEFPTVA EANDFGARIT LPQKTLKHLL AMVHFAMAQQ DIRYYLNGML LVVDGKQVMA VATDGHRLAY CGVETGEQPA GAGGRHEVII PRKTILELQR LLEDVDDPVS VQLASNQVKF TFGNIELISK LVEGKFPDFQ RVIPKGYRNS FTIDRAFLQQ ALQRTAILTT DKFKGVRCML DTNVLKISST NADQEEAQEE LEIDYQGDAL DIGFNVTYLL DVLANLKAEK VQVSLGDSNS SALITLPDDD TFKYVVMPMR I
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