| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3439 |
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| Symbol | vsr |
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| ID | 1222303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3710105 |
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| End bp | 3710569 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637239856 |
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| Product | patch repair protein |
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| Protein accession | NP_521558 |
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| Protein GI | 17548156 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACACCA TATCGAAGGT GGCTCGCAGT GCCCTTATGG CAAGAATCAG AAACAAAGAC
TCGAAGCCAG AACGCGCTTT ACGCTCAGCC ATGCATCGGA CGGGGCTCCG TTTTCGACTT
CATCGCACGG ATCTCCCTGG GACGCCCGAC ATTGTTCTTC CCGCAACGAA AATTGCGATC
TTTGTTCACG GATGTTTCTG GCATCAACAT GCGCGATGCA AGCTCGCGTC GTCGCCCCGG
AGCAATACCG AATACTGGCT TCCAAAACTA CAGCGTAACG TTGAGCGGGA TCGGCGCGTC
GCTAAAGCTC TGCGGCAGTT AGGCTGGGCA GTTCTCACTG TATGGGAATG CCAAACACGT
AAAGAAATCT CGCTCGCGGT GGCTTTGAAA CGAATACACA CCAGCGTACG AAAAAGAAAG
GATAAAAATG CTACTCAGTC TATTCTGCGG CGCAGGAGGG CTTGA
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| Protein sequence | MDTISKVARS ALMARIRNKD SKPERALRSA MHRTGLRFRL HRTDLPGTPD IVLPATKIAI
FVHGCFWHQH ARCKLASSPR SNTEYWLPKL QRNVERDRRV AKALRQLGWA VLTVWECQTR
KEISLAVALK RIHTSVRKRK DKNATQSILR RRRA
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