Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3392 |
Symbol | |
ID | 1222256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3657231 |
End bp | 3657905 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637239809 |
Product | response regulator transcription regulator protein |
Protein accession | NP_521511 |
Protein GI | 17548109 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC TCCTGATCGA GGACAACGCA CCCCTGGCGC AGTGGTTGTC CGAAGCCCTG CGCCGTGCGC AGTTTACGGT CGATCATGCC AGTGATGGCG AATCGGCCGA TACCCTGTTG CTGACGCAGC ACTACGACGT CGTGCTGCTT GACCTGCAGT TGCCGTCGCT GTCCGGCCGC GCCGTGCTGC AGCGTCTGCG CGATCGACGC AACGCCGTGC CGGTGATGAT CCTGACCGCC GCCGGCGGCA TCGATGACAA GGTTGCCTGT CTGGGCGCCG GCGCGGACGA CTATCTCGTC AAGCCGTTCG AGATCCGCGA ACTGATCGCC CGCATCCAGG TACTGGTGCG CCGCAACACG CCGGCCAACG CGGTCGAGCT GCAGTGCGGT GACCTGTCCT ATCACACCGG CAGCCGCACG TTTGCGCTGT CCGGCCGGCC GCTGGTGCTG CCGGCGCGCG AACACACCGT GCTGGAGATC CTGATGCTCA AGCTCGGGCG CACGGTGTCC AAGCCGGCGC TGGTCAACGG CGTGTTCGGG CTGGAGGACG ACGCCAGCCC CGAGGCGATC GAGATCTACA TCCATCGGCT GCGCAAGAAG CTCGAACATT CCGCTGCCAC CATCGTTACC CTGCGCGGGC TCGGCTATCT GTTGCGCGAT GCGTCGACCC AGTAG
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Protein sequence | MKLLLIEDNA PLAQWLSEAL RRAQFTVDHA SDGESADTLL LTQHYDVVLL DLQLPSLSGR AVLQRLRDRR NAVPVMILTA AGGIDDKVAC LGAGADDYLV KPFEIRELIA RIQVLVRRNT PANAVELQCG DLSYHTGSRT FALSGRPLVL PAREHTVLEI LMLKLGRTVS KPALVNGVFG LEDDASPEAI EIYIHRLRKK LEHSAATIVT LRGLGYLLRD ASTQ
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