| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3390 |
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| Symbol | |
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| ID | 1222254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3654900 |
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| End bp | 3656030 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637239807 |
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| Product | porin signal peptide protein |
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| Protein accession | NP_521509 |
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| Protein GI | 17548107 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0795633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTA CCACATTCGC CCTTGCGGCG ATCACGGCTG CCGTGGCCGG TCTGGCCGCC
ACCGGCGCTC AAGCGCAAAC CTCGGCCGTC ACGCTGTATG GCCTGATCGA TACCACCATC
AGTACGGTCA GCAATACCAA CGCCGCGGGC GCCCGTACCA CCGGCTTCCA GGTGCCCTGG
TTCAGCGGCA GCCGCTGGGG CCTGACCGGC AAGGAAGACC TGGGCGGCGG CACGTCGGCC
ATCTTCAAGC TGGAATCCGA ATTCGAAACC CCCACCGGCA ACATGGACAC CCCGGGGGTG
CTGTTCAACC GCGATGCCTG GGTGGGCCTG TCGAATCCCC TCTTCGGCAA GCTGACCTTC
GGCCGCCAGA ACGCGCTGGC GCGCGACGTC TCCGGCATCT ACGGCGACCC GTACACCAGC
GCCGAGGTGA CCCTGGACGA AGGCGGCTAC ACCAACGTCA ACAACTTCAA GCAACTGATC
TTCTACGCAG GCAGCGCCAC GGGCACGCGC CTGAACAATG GCGTGGTGTG GAAGAAGCTG
TGGGACGGCG GCTTCTTCAC CGGCCTGGCC TACCAGTTCG GCGAAGTGCC GGGCCAGTTC
TCGCAGAACA CCACTGAGTC GGCGGCCCTG GGCTACAACG GCGGCAACTT CCACCTGGCA
GCCTTCGCGC AGCAGGCCAA GGTCAACGGA TTCACCGACC GCTCGTATTC GCTGGGCGGC
AACGTGATCC TGGGCATGTT CCGCGTCAAT GCCGGCTACT ACCACTACAC CGGCGAGCAG
CCGGCCGCGA TCGGCAACCG CAAGGACGAC GCCTACACCG TGTCGCTGAA GATCGCTCCG
CCGGGTGCCT TCGACTACGA AATCGGCTAC CAGATCATGA AGGCCGGCAA TGCCGCGTTC
AACGCCGACG GCAACACGCT TAACGCCTAC GCCGACGTGT CGACGGCCAC CGCTTCCGGC
AGCGGCCGCA AGAACACGCT GTATGGCTCG GTGTTCTATC ACGTCTCCAA GCGCACCGAG
TTCTATGTGG CGGCCGACTA CATGAAGCTG AAGGATCAGT ACATCGTCGG CTCGACCAAC
GGCCACAACA GCCAGACCGA GTTCGGCGTC GGCATGCGTA CCCGCTTCTG A
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| Protein sequence | MSRTTFALAA ITAAVAGLAA TGAQAQTSAV TLYGLIDTTI STVSNTNAAG ARTTGFQVPW
FSGSRWGLTG KEDLGGGTSA IFKLESEFET PTGNMDTPGV LFNRDAWVGL SNPLFGKLTF
GRQNALARDV SGIYGDPYTS AEVTLDEGGY TNVNNFKQLI FYAGSATGTR LNNGVVWKKL
WDGGFFTGLA YQFGEVPGQF SQNTTESAAL GYNGGNFHLA AFAQQAKVNG FTDRSYSLGG
NVILGMFRVN AGYYHYTGEQ PAAIGNRKDD AYTVSLKIAP PGAFDYEIGY QIMKAGNAAF
NADGNTLNAY ADVSTATASG SGRKNTLYGS VFYHVSKRTE FYVAADYMKL KDQYIVGSTN
GHNSQTEFGV GMRTRF
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