| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3383 |
|---|
| Symbol | kdpB |
|---|
| ID | 1222247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 3643640 |
|---|
| End bp | 3645874 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637239800 |
|---|
| Product | potassium-transporting ATPase subunit B |
|---|
| Protein accession | NP_521502 |
|---|
| Protein GI | 17548100 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2216] High-affinity K+ transport system, ATPase chain B |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01497] K+-transporting ATPase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTCC GCTATCCTGA ATCCGATCCG GTGGTGCGCA CCGTCAAGCA CCGCCTGGAC
AGCACGGACG CTGCCGCCCA TGCCGCCGCG CCCGCCCGCA CCACCACGCA CCCCGGCGCG
CACCCTCCGC TGAGCGCCAA GGACGTGCGC CGGCTGTCGA TGTTCGCGCC GGCACTGGTC
AGGCCCGCCA TCGTCGACAG TTTCCGCAAG CTGTCGCCGC GCGCGCAGGC CAAGAACCCG
GTGATGTTCG TCGTCTATAT CGGCAGCATC CTGACCACCC TGCTGTGGGT GATGGCGCTG
CGCGGCCAGG CCGAGGCGCC GGCGGGCTTC ATCCTCGCCG TGTCGGTGTG GCTGTGGTTC
ACCGTGCTGT TCGCCAACGT TGCCGAGGCG CTGGCCGAGG GCCGCAGCAA GCAGCAGGCC
GCCTCGCTGC GCGGCATCAA GACCACCGTG CAGGCCAAGG TGCTGGCCGA TCCCCAGCGG
CGCGACCGCG TGCAGCCGCG CGCGGCCACC GCGCTGCGCC GTGGCGACAT CGTCCTCATC
GAAGCCGGCG ACATGGTGCC CGGCGACGGC GAGGTCATCG AAGGCGTGGC CTCGGTGGAC
GAGAGCGCCA TCACCGGGGA ATCCGCGCCG GTGATCCGCG AGTCCGGCGG CGATTTCTCG
TCGGTCACCG GCGGCACGCG CGTGCTGTCG GACTGGATCG TGGCGCGCAT CACCGCCAAC
CCGGGCGAGA GCTTCCTCGA CCGCATGATC TCGATGGTGG AAGGCGCCAA GCGGCAGAAG
ACGCCCAACG AGCTGGCGCT GACCATCCTG CTGGTGAGCC TGACCATCAT CCTGCTGCTG
GCGACCGTCA CGCTGCTGCC GTACTCGATC TTCTCGGTGG AGGTGATGAA GGCCGCGGGC
GTGACAAGTT CGCCGATCAC CATCACCGTG CTGGTGGCGC TGCTGGTGTG CCTGATCCCG
ACCACCATCG GCGGGCTGCT GTCGGCCATC GGCGTGGCCG GCATGAGCCG CATGATGCAG
GCCAACGTGA TCGCCACCTC GGGCCGCGCG GTGGAAGCCG CCGGCGACGT CGACGTGCTG
CTGCTCGACA AGACCGGCAC CATCACGCAC GGCAACCGCC AGGCCTCGCG CTTCATCCCC
GCGCCGGGCG TGACGGTCAA GGCGCTGGCC GAGGCCGCGT GGCTGTCGTC GCTGGCCGAC
GAGACGCCCG AGGGCCGCAG CATCGTCACG CTGGCGCGCC AGCTGGGCGA GGCCGCCGTC
GACGAGGCGG CGCTGGCGCG GTCGCAGCCG GTGTTCGTGC CCTTCTCCGC GCAGACGCGC
ATGAGCGGCA TCAACGTGGC CCTGGGCGAC GCAGCGCACC AGATCCGCAA GGGCGCCGCC
GATGCCATCC GCACGCACGT GACGGTGCTG GCCGGCCGGT TTCCCGAGGC CGTGCTGGCC
GCCGTGGAAG ACGTGGCGCG CAAGGGCGGC ACGCCACTGG TGGTGTCCGA CAACGACCGC
GTGATGGGCG TGGTGGAACT GAAGGACATC GTCAAGGCCG GCATTCGCGA GCGCTTTGCC
GAGCTGCGCC AGATGGGCAT CAAGACGGTG ATGATCACCG GCGACAACCG CCTGACCGCC
GCCTCCATCG CGGCCGAAGC GGGCGTCGAC GACTTCATCG CCGAGGCCGC GCCCGAGACC
AAGCTCGCGC TGATCCGCGA ACAGCAGGCG CAGGGCCGCC TCGTCGCCAT GACCGGCGAC
GGCACCAACG ACGCGCCCGC GCTCGCCCAG GCCGATGTGG CGGTCGCCAT GAACAGCGGC
ACGCAGGCGG CCAAGGAGGC CGGCAACATG GTCGACCTGG ATTCCAGCCC GACCAAGCTG
ATCCAGATCG TGGAGATCGG CAAGCAGATG CTGATGACGC GCGGCTCGCT CACCACGTTC
TCCATCGCCA ACGATGTGGC CAAGTATTTC GCCATCATCC CGGCGGCGTT CGCGACCACG
TATCCGCAAC TGGCCGCGCT CAACGTGATG CGCCTGGCCA CGCCCGCGTC GGCCGTGATG
AGCGCGGTGA TCTTCAACGC GCTGATCATC GTGTTCCTGA TCCCGCTGGC GCTCAAGGGC
GTGAAGTACC GCCCGCTCGG CGCCGCCGCG CTGCTGCGCC GCAATCTCTG GATCTACGGC
CTGGGCGGCC TGCTGCTGCC CTTCCCCGGC ATCAAGCTGA TCGACATGTT CCTGGCCGCG
ATGGGCTGGG TCTGA
|
|---|
| Protein sequence | MALRYPESDP VVRTVKHRLD STDAAAHAAA PARTTTHPGA HPPLSAKDVR RLSMFAPALV
RPAIVDSFRK LSPRAQAKNP VMFVVYIGSI LTTLLWVMAL RGQAEAPAGF ILAVSVWLWF
TVLFANVAEA LAEGRSKQQA ASLRGIKTTV QAKVLADPQR RDRVQPRAAT ALRRGDIVLI
EAGDMVPGDG EVIEGVASVD ESAITGESAP VIRESGGDFS SVTGGTRVLS DWIVARITAN
PGESFLDRMI SMVEGAKRQK TPNELALTIL LVSLTIILLL ATVTLLPYSI FSVEVMKAAG
VTSSPITITV LVALLVCLIP TTIGGLLSAI GVAGMSRMMQ ANVIATSGRA VEAAGDVDVL
LLDKTGTITH GNRQASRFIP APGVTVKALA EAAWLSSLAD ETPEGRSIVT LARQLGEAAV
DEAALARSQP VFVPFSAQTR MSGINVALGD AAHQIRKGAA DAIRTHVTVL AGRFPEAVLA
AVEDVARKGG TPLVVSDNDR VMGVVELKDI VKAGIRERFA ELRQMGIKTV MITGDNRLTA
ASIAAEAGVD DFIAEAAPET KLALIREQQA QGRLVAMTGD GTNDAPALAQ ADVAVAMNSG
TQAAKEAGNM VDLDSSPTKL IQIVEIGKQM LMTRGSLTTF SIANDVAKYF AIIPAAFATT
YPQLAALNVM RLATPASAVM SAVIFNALII VFLIPLALKG VKYRPLGAAA LLRRNLWIYG
LGGLLLPFPG IKLIDMFLAA MGWV
|
|---|
| |