| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3369 |
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| Symbol | |
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| ID | 1222233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3628670 |
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| End bp | 3629947 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637239786 |
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| Product | putative AVRPPHE avirulence protein |
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| Protein accession | NP_521488 |
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| Protein GI | 17548086 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCG TCCTGCCGTC GATCCTGAGG TGCTTCCGCC CGGCCGTCTC GCGCCCGGAG
GCGGAAACCG CGGCCCCGTC GTCGTCCCAG GAGCACAACC GGCCGGGCTC GCCGGAGCGC
AGCCCCCGCC GGGCGCCAGC TGCCCTGCAA GGCCTGACGC CACGGGCCGG ATCGTCGCGC
CGGCAAGCGG CACCCGAGGC ACCGGCCGGG CCGGCGCGCT TCCTGACCGA TGGCGAACGC
CAGTTCGGCG GCTATCTGAT GGCCCGGGAT GTCGACCAGC GTCCCGTCCA CGGTGAACCA
CTGGACACAT TGCGCAGCGC CAACGAAACA CTGCTGCAAA CCCGCCGGAT ACTGACGCAC
GGGCGCGGCA ACGTGGAGGA CGATATCGAC GCCACCCATG GATTGAGCAC GCACATCGCG
CAGGGTGGCC GCTCCATCCA GGAATCCATG TGGCGTGCCC ATCCCAAGCC TGTCGTATGG
GCCGCCATCG CAATGGTGGC AGGGGCGGGG AACTGCGGCG AACACGCCGA TCTGGCCACC
TTCCTCCACG CCGCGAAACT GAAGGAAGGG GAAGCGGTCG ACAACGTCCA TATCGACGAC
TTCGACCACT TCTGGGCAAT CGTGCACCGT GCCGAACCGG ATCTGGAACG CGACGTCTAC
ATCGACGCAT GGGGCAAGGG GCCGGCGATC TTTGCGGTGG ACGGCATGAT GACCTACCGT
CCCGGGGAAC GGAGAACGAA GTTCGGCTAC GACAAGGCTT CCGGCGAGGA AGCCCACGCC
GACATGGAAA TGCTGGCGAC CGTGCTGGCG ACACGGATGC GCGGCGGCAT CAGCAATACC
ATGCGCCGGC TCGGCCCGGA CTATCGCTAC CCGCCCGAGC GTGTCTGGGC GGTAACGCCC
ATCGTGGCGC AACGATTCAC GGATCGCGTC AAAGCAGAAA TGTCGAAGCC GGCCGACCTG
GGCAAGCTCA TGGTGCCCCC GGACTGTGCC ACCCCTTCCT CCGTCGAGCC GCCGGTCACC
AACGAGCGCC TGATGCAACC GCTGCGGCAC GAGATCCACG CCACGCGCAT CGCCAGGACG
CTCGGCGCGC ACAGCGTCGA CACCATGGCG CATGCTGCCC GACGCATCGT TGCAGTCGCA
TCCGATCTGC AGGGGTACCC CATCGAGGCG CATCCTCTCC AGGCCAAGAA GGATGCAGAG
GATATTGCCG CCGCTGAACG GCGCCGCGCC CGTCGCGCTG CCCTGGGCAA AGGCGAGCCG
CCCGCCACGG AAAGCTGA
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| Protein sequence | MPPVLPSILR CFRPAVSRPE AETAAPSSSQ EHNRPGSPER SPRRAPAALQ GLTPRAGSSR
RQAAPEAPAG PARFLTDGER QFGGYLMARD VDQRPVHGEP LDTLRSANET LLQTRRILTH
GRGNVEDDID ATHGLSTHIA QGGRSIQESM WRAHPKPVVW AAIAMVAGAG NCGEHADLAT
FLHAAKLKEG EAVDNVHIDD FDHFWAIVHR AEPDLERDVY IDAWGKGPAI FAVDGMMTYR
PGERRTKFGY DKASGEEAHA DMEMLATVLA TRMRGGISNT MRRLGPDYRY PPERVWAVTP
IVAQRFTDRV KAEMSKPADL GKLMVPPDCA TPSSVEPPVT NERLMQPLRH EIHATRIART
LGAHSVDTMA HAARRIVAVA SDLQGYPIEA HPLQAKKDAE DIAAAERRRA RRAALGKGEP
PATES
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