Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3362 |
Symbol | |
ID | 1222226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3621042 |
End bp | 3621872 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637239779 |
Product | hypothetical protein |
Protein accession | NP_521481 |
Protein GI | 17548079 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCGT TTCGTTCCGC ATGGGCCGGT GCACCGGCCG GGATCGCGGT GGCGCGCACC GGCCAGTCGG TGCCGCTGCT GAACGCCGCT GCCGCGCTGG CCGTGGCAAT GGCGGTGGGC GGCTGGCTGT CCGGCGCGCG CCACGCCTCG GCCATCGATG CCACGCAGAT CGAGAGCTGG CGCGCCATGG TCGCGCAGGC AATGGAGCCC CAGGCGCTGC GCCAGTTGCG CCAGCTCGCG CGCGGCGGCT CGACACCGGC ACGGACCGCG CTGGGCGAAG CGCTGCTGGA CAGCCGCGAT GCGTCGCTGC GCCATGAAGG CGTGCGCTGG CTGGAAGCCG CCGCGCAGCC GGCCGACGGC GCGCCGGGCG ACGCGCGGGC ACAGCTTGCG CTGGGCAAGG CGCTGTTGCT CGGCACCGGC GGCGTGGCGC GCGATTACCC GCGCGCGCTG CATCTGCTGC GCCAGGCCGC CGACCGCGGC GATGCGGCAG CCGCGTATTA CCTCGGCCTG ATGTATCGCA GCGGCTACGG CACCGCGGCG AACACGGCGC TGGCCGCGCA CTGGTTCGAC GGTGCCGCGC GCCACGGCAT TCCGGCCGCG ATGTTCATGC TGGCCAACGC TTACCGCGAC GGCGATGGCG TGCCGCGCGA CGAAGCGCGC GCGCTGGCGC TGTACGAGCA GGCCGCCGAG CACGAACTGC CGGAAGCCGT GCAGGCGCTG GCGATGGCTT ACCAGAACGG CGAGCTCGGT CTCGCGCGCG ACGATGCCGC CTTCCGCAAG CAGTGGCTCG AAACCGCGCA CGCACTGAAG CACCCAGCGC TGACGCCGTA G
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Protein sequence | MSSFRSAWAG APAGIAVART GQSVPLLNAA AALAVAMAVG GWLSGARHAS AIDATQIESW RAMVAQAMEP QALRQLRQLA RGGSTPARTA LGEALLDSRD ASLRHEGVRW LEAAAQPADG APGDARAQLA LGKALLLGTG GVARDYPRAL HLLRQAADRG DAAAAYYLGL MYRSGYGTAA NTALAAHWFD GAARHGIPAA MFMLANAYRD GDGVPRDEAR ALALYEQAAE HELPEAVQAL AMAYQNGELG LARDDAAFRK QWLETAHALK HPALTP
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