Gene RSc3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3362 
Symbol 
ID1222226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3621042 
End bp3621872 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content74% 
IMG OID637239779 
Producthypothetical protein 
Protein accessionNP_521481 
Protein GI17548079 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCGT TTCGTTCCGC ATGGGCCGGT GCACCGGCCG GGATCGCGGT GGCGCGCACC 
GGCCAGTCGG TGCCGCTGCT GAACGCCGCT GCCGCGCTGG CCGTGGCAAT GGCGGTGGGC
GGCTGGCTGT CCGGCGCGCG CCACGCCTCG GCCATCGATG CCACGCAGAT CGAGAGCTGG
CGCGCCATGG TCGCGCAGGC AATGGAGCCC CAGGCGCTGC GCCAGTTGCG CCAGCTCGCG
CGCGGCGGCT CGACACCGGC ACGGACCGCG CTGGGCGAAG CGCTGCTGGA CAGCCGCGAT
GCGTCGCTGC GCCATGAAGG CGTGCGCTGG CTGGAAGCCG CCGCGCAGCC GGCCGACGGC
GCGCCGGGCG ACGCGCGGGC ACAGCTTGCG CTGGGCAAGG CGCTGTTGCT CGGCACCGGC
GGCGTGGCGC GCGATTACCC GCGCGCGCTG CATCTGCTGC GCCAGGCCGC CGACCGCGGC
GATGCGGCAG CCGCGTATTA CCTCGGCCTG ATGTATCGCA GCGGCTACGG CACCGCGGCG
AACACGGCGC TGGCCGCGCA CTGGTTCGAC GGTGCCGCGC GCCACGGCAT TCCGGCCGCG
ATGTTCATGC TGGCCAACGC TTACCGCGAC GGCGATGGCG TGCCGCGCGA CGAAGCGCGC
GCGCTGGCGC TGTACGAGCA GGCCGCCGAG CACGAACTGC CGGAAGCCGT GCAGGCGCTG
GCGATGGCTT ACCAGAACGG CGAGCTCGGT CTCGCGCGCG ACGATGCCGC CTTCCGCAAG
CAGTGGCTCG AAACCGCGCA CGCACTGAAG CACCCAGCGC TGACGCCGTA G
 
Protein sequence
MSSFRSAWAG APAGIAVART GQSVPLLNAA AALAVAMAVG GWLSGARHAS AIDATQIESW 
RAMVAQAMEP QALRQLRQLA RGGSTPARTA LGEALLDSRD ASLRHEGVRW LEAAAQPADG
APGDARAQLA LGKALLLGTG GVARDYPRAL HLLRQAADRG DAAAAYYLGL MYRSGYGTAA
NTALAAHWFD GAARHGIPAA MFMLANAYRD GDGVPRDEAR ALALYEQAAE HELPEAVQAL
AMAYQNGELG LARDDAAFRK QWLETAHALK HPALTP