Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3358 |
Symbol | |
ID | 1222222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3617178 |
End bp | 3617717 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239775 |
Product | hypothetical protein |
Protein accession | NP_521477 |
Protein GI | 17548075 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGCT CTTCCGCTGC CGCCAAAGAT TCGGACGCCC ATCAGCCGAC CCCGCCCGAA GCGGCCGGAC TGCGCCGCCG CGACCGCATC GCCGTGCGCG AATCGGGTGT GCACGGACGC GGCGTCTACG CGGTGGCGGC GATCGCCAAG GGCAAAAAGA TCATCGAATA CAAGGGCGAG CACATTTCGT GGAAGGAAGC GTTGCGCCGT CACCCGCATG ATCCGGACGA CCCCAACCAC ACCTTCTATT TCAGCCTGGA AGACGGCAGC GTGATCGACG CCAAGTACGG CGGCAATCGC GCGCGCTGGA TCAACCATGC CTGCAAGCCG AACTGCGAGG CGCGCGAGAA GGACGGCCGT GTCTTCATCC ACGCGCTGCG CGATATCGAC GCGGGCGAGG AGCTGTTCTA CGACTACGGG CTGGTGATCG AAGGGCGCCA GACCAAGGCG CTCAAGGCAC AGTTCGCCTG CCATTGCGGC GCGAAGAAGT GCCGCGGCAC CATGCTCGCA CCGCCCGAGA AGAAGGAAAA GAAGCAGTAG
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Protein sequence | MPRSSAAAKD SDAHQPTPPE AAGLRRRDRI AVRESGVHGR GVYAVAAIAK GKKIIEYKGE HISWKEALRR HPHDPDDPNH TFYFSLEDGS VIDAKYGGNR ARWINHACKP NCEAREKDGR VFIHALRDID AGEELFYDYG LVIEGRQTKA LKAQFACHCG AKKCRGTMLA PPEKKEKKQ
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