Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3347 |
Symbol | |
ID | 1222211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3608103 |
End bp | 3608582 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637239764 |
Product | transcription regulator protein |
Protein accession | NP_521466 |
Protein GI | 17548064 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR02044] Cu(I)-responsive transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.445877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTG CCGACCTGAA CGATGCATCG CAAGACGGCC CCGTCAACAT CGGCGAGGCG GCCAGGGCCA GCGGCGTGTC GGCCAAGATG ATCCGCTACT ACGAGCGCAT CGGTCTGCTG CCGCCCAGCC CGCGCACCGA GGGCAACTAC CGGGTCTATG ATCCGCGCGC GCTGCACGTG CTGCGGTTCA TCCACCGGGC GCGTTCGCTC GGGTTTTCGC TCGAAGAGAT TCGCACGCTG CTCTCGCTGT GGCACGACCG CGCGCGCGCC AGCGCCGACG TGAAGGCCAT CACGCTGCGC CACGTGGCCG ACCTCGACGC GCGCATCCGC GAGCTGCAAG GCATGCGCGA TACGCTGGTG ACGCTCGCCG ATGCCTGCCA TGGCGACGAC CGCCCGGACT GCCCGATCCT CGAGGGCGTG GCCGGGGAGG CTTCGCCCTG CTGCGATGCA GCGCTGCCCG ATCCGGACCG ACACGGCTGA
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Protein sequence | MTRADLNDAS QDGPVNIGEA ARASGVSAKM IRYYERIGLL PPSPRTEGNY RVYDPRALHV LRFIHRARSL GFSLEEIRTL LSLWHDRARA SADVKAITLR HVADLDARIR ELQGMRDTLV TLADACHGDD RPDCPILEGV AGEASPCCDA ALPDPDRHG
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