Gene RSc3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3347 
Symbol 
ID1222211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3608103 
End bp3608582 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content70% 
IMG OID637239764 
Producttranscription regulator protein 
Protein accessionNP_521466 
Protein GI17548064 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.445877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTG CCGACCTGAA CGATGCATCG CAAGACGGCC CCGTCAACAT CGGCGAGGCG 
GCCAGGGCCA GCGGCGTGTC GGCCAAGATG ATCCGCTACT ACGAGCGCAT CGGTCTGCTG
CCGCCCAGCC CGCGCACCGA GGGCAACTAC CGGGTCTATG ATCCGCGCGC GCTGCACGTG
CTGCGGTTCA TCCACCGGGC GCGTTCGCTC GGGTTTTCGC TCGAAGAGAT TCGCACGCTG
CTCTCGCTGT GGCACGACCG CGCGCGCGCC AGCGCCGACG TGAAGGCCAT CACGCTGCGC
CACGTGGCCG ACCTCGACGC GCGCATCCGC GAGCTGCAAG GCATGCGCGA TACGCTGGTG
ACGCTCGCCG ATGCCTGCCA TGGCGACGAC CGCCCGGACT GCCCGATCCT CGAGGGCGTG
GCCGGGGAGG CTTCGCCCTG CTGCGATGCA GCGCTGCCCG ATCCGGACCG ACACGGCTGA
 
Protein sequence
MTRADLNDAS QDGPVNIGEA ARASGVSAKM IRYYERIGLL PPSPRTEGNY RVYDPRALHV 
LRFIHRARSL GFSLEEIRTL LSLWHDRARA SADVKAITLR HVADLDARIR ELQGMRDTLV
TLADACHGDD RPDCPILEGV AGEASPCCDA ALPDPDRHG