Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3346 |
Symbol | |
ID | 1222210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3607186 |
End bp | 3608046 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239763 |
Product | putative lysophospholipase protein |
Protein accession | NP_521465 |
Protein GI | 17548063 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.413653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAG CCCCCGCCAC GGTCGATGCG CTGGAGACGC GCCAGCGGAT GAAGGATGGC ACCGAGCTGT TCGTGCGGAC CTGGCTGCCG GCGCCCGAGG CGGGTGAGCC CCGCGGCACC GTCATCCTCG TGCATGGCAT GGCCGAGCAC AGCGGCCGGT ATCCGCATGT GGCGCAGGTG CTGTGCGAGC TCGGCCTGCG CGTGCGCGCC TTCGATCTGC GCGGCCACGG CAGGAGCGGC GGCCCGCGCA TGGCGCTCGA CGCGCCCGAC AACTACCTCA CCGATCTCGC GGAAATTCTC GATGCCGTCG TCGCCGAGTG GAACGAGATG CCGTTCGTGC TCGGCCACAG CATGGGCGGG CTGATCGTCG CGCGCTTCGC CACCGCGCGC GTGCGGCCGG TGCGCGGCGT GCTGCTGTCG TCGCCGGCGC TGCGGCTCAA GCTGCCGCCC GGCGCCAATG CCGTGCTCGG GCTGCTCAGC GCGCTGGCGC CGAAGCTGCC GGTGCCCAAT CCCGTCGATC CTGCCAGGCT GTCGCATGAT CCGTCGGTGG GCGCCGCGTA TCGGGCGGAT CCGCAGGTGC AGAAGACCAT CAGTGCGTCG GTGCTGGCGT TCATGCTCAA CGCCATCACC CAGGCGCAGC AGGACGCGCC CCGGCTGGAG GCGCCCATGT TGCTGCTGGC GGGCGGGGCG GACACCATCG TCGATCCTTC GGGCAGCCGG GATTTCTGCG CCGGCGCGCC GGAGGACCTG CGCACGCTGG CCTGGTTCGA GACCGCGTAT CACGAGCTGT TCAACGAGGC CGAGCCGATG CGCGGTGAAG CGTTCGGGAC GATGCGGGCG TGGCTGGCCG GGCGGATCTG A
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Protein sequence | MTQAPATVDA LETRQRMKDG TELFVRTWLP APEAGEPRGT VILVHGMAEH SGRYPHVAQV LCELGLRVRA FDLRGHGRSG GPRMALDAPD NYLTDLAEIL DAVVAEWNEM PFVLGHSMGG LIVARFATAR VRPVRGVLLS SPALRLKLPP GANAVLGLLS ALAPKLPVPN PVDPARLSHD PSVGAAYRAD PQVQKTISAS VLAFMLNAIT QAQQDAPRLE APMLLLAGGA DTIVDPSGSR DFCAGAPEDL RTLAWFETAY HELFNEAEPM RGEAFGTMRA WLAGRI
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