Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3344 |
Symbol | |
ID | 1222208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3604481 |
End bp | 3605251 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239761 |
Product | ABC transporter ATP-binding protein |
Protein accession | NP_521463 |
Protein GI | 17548061 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGG ACATCATTCT CGAGACGCGC GGACTCACCA AGGCCTTCAA GGGCTTCACC GCCGTGTCCG ACGTCAACCT CCGCGTGCGG CGCGGTTCCA TCCACGCCCT GATCGGCCCG AACGGCGCCG GCAAGACCAC CTGCTTCAAC CTGCTGACCA AATTCCTGGT GCCCACGCGC GGCACCATCC TGTTCAACGG CGTCGACATC ACGCCGGAGC GGCCGGCGCA GATCGCGCGC CGGGGCGTGA TCCGCTCGTT CCAGATCTCC GCCGTGTTTC CGCACCTGTC CGTGCTGGAA AACGTTCGCA TCGGGCTGCA GCGCCAGCTC GGCACGGCCT ATGCCTTCTG GCGCAGCGAG AAGACGCTGG CGGTGCTCAA CGACCGGGCC ATGCAGCTGC TCGACCAGGT GGGCCTCACG CCGTTCGCCG GCACGGTGAC GGTGGAGCTG CCCTATGGCC GCAAGCGCGC CCTGGAGATC GCCACCACGC TGGCGATGGA GCCCGAGCTG ATGCTGCTCG ACGAGCCGAC GCAGGGCATG GGCCACGAAG ACGTGGACCG CGTGACCGAG CTGATCCAGC GCGTGGCCGA GGGCCGCACG ATCCTGATGG TCGAGCACAA CATGAACGTG GTGTCATCCA TCGCCGACAA GATCACGGTG CTGCAGCGCG GCCAGATCCT GGCCGAGGGC CCGTACGAAG ACGTCTCGAA GAACCCGCAG GTGATGGAGG CCTACATGGG CACCGCCGAT GCGGCGCTGG AAGGCCACTG A
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Protein sequence | MAQDIILETR GLTKAFKGFT AVSDVNLRVR RGSIHALIGP NGAGKTTCFN LLTKFLVPTR GTILFNGVDI TPERPAQIAR RGVIRSFQIS AVFPHLSVLE NVRIGLQRQL GTAYAFWRSE KTLAVLNDRA MQLLDQVGLT PFAGTVTVEL PYGRKRALEI ATTLAMEPEL MLLDEPTQGM GHEDVDRVTE LIQRVAEGRT ILMVEHNMNV VSSIADKITV LQRGQILAEG PYEDVSKNPQ VMEAYMGTAD AALEGH
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