Gene RSc3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3332 
Symbol 
ID1222196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3594672 
End bp3595568 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content69% 
IMG OID637239749 
Producttranscription regulator protein 
Protein accessionNP_521451 
Protein GI17548049 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC TGCGCAGCAT GGAGACCTTC GTCGCCGTGG TGGATGCCGG CAGCTTCACC 
GAGGCGGCGA TGCAGCTGGA GATGTCGGCG GTGATGGTCG GCAAGTACGT GCGCGAGCTG
GAAACACGGC TGGGGGCGCG GTTGCTGCAA CGCAGCACGC GCCGCCAGAG CCTGACCGAC
GCCGGCCGCG TGTTCTATGA AGACGCCAAG CGCGTGCTGG AACAGGTACG CTGGGCCGAG
ACCTCGGTCG AGCGGCTGCG CGCGCAGCCC TCCGGCACGC TGCGGGTCAG CGCGCCCACC
ACCTTCGGCG CCTGCGTGAT CGCGCCGCTG ACGGCGACCT TCCAGCAGGC CCATCCGCAG
GTGCGCGTGG AGCTGGACCT GAGCAACCGC ATGGTCGACC TGGCGGACGA AGGCTTCGAC
CTCGCCGTGC GCATCGGCGC GCTGGGCGAT GCCGACCTGG TGGCGAAACC GCTGTGCGCG
TACCGGATGG TCATCAGCGC CTCGCCCGAC TATCTCGCGC GCCACGGCCG GCCCGAAACG
CCGGCCGACC TGCCGGCCCA TCGCTGCCTG TCCCACATGG TGTGGAACAG CCGCAATGCG
TGGCAGCTGT CCGGCTGGGA TGGCACGACA TCCTGGCGCG ACGATCCGGC CTTCAGCTGC
AACGACGGCC ACGGCCTGCG GATGGCCGCG ATCGCCGGTG CGGGGCTGCT GCTGCAGCCG
GAGGTGCTGG TGGCCGAGGA CCTGGCGAGC GGCCGGCTGG TGCGCGTGCT GCAGACGTAT
GCGCCGCAGC CGCGGCCGAT CCATCTCGTG TATCGGCAAG ATCGGCGGCC TTTGCCGAAG
TTAACGGCTT TTACGGCGCA TTTGCTGGAG CAGGTACCAG CAAGAGGATT GACCTAG
 
Protein sequence
MDKLRSMETF VAVVDAGSFT EAAMQLEMSA VMVGKYVREL ETRLGARLLQ RSTRRQSLTD 
AGRVFYEDAK RVLEQVRWAE TSVERLRAQP SGTLRVSAPT TFGACVIAPL TATFQQAHPQ
VRVELDLSNR MVDLADEGFD LAVRIGALGD ADLVAKPLCA YRMVISASPD YLARHGRPET
PADLPAHRCL SHMVWNSRNA WQLSGWDGTT SWRDDPAFSC NDGHGLRMAA IAGAGLLLQP
EVLVAEDLAS GRLVRVLQTY APQPRPIHLV YRQDRRPLPK LTAFTAHLLE QVPARGLT