| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3329 |
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| Symbol | |
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| ID | 1222193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3592071 |
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| End bp | 3593219 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239746 |
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| Product | amino-acid-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_521448 |
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| Protein GI | 17548046 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.279448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.702706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTT CGCGCGCAAC CCGCATCGCA CTGGCCGCGA CGGCATTCCT GGCAAGCACG
GCGTTCGCCC AGGTGAAGGT CGGCGTCACG GTGTCGGCCA CCGGGCCGGG GGCATCGCTG
GGGATTCCGG AGAAGAACAC GGTGTCGCTG CTGCCCAAGG AGATCGCCGG CAAGAAGATC
GAATACATCG TGCTGGACGA TGCCTCCGAC ACCACCACTG CCGTCAAGAA CACGCGCAAG
CTGATCACCG AAGACAAGGT CGATCTCGTG ATCGGCTCCA CCATCACGCC GACCTCGCTG
GCGATGGTGG ACGTGGCGGC CGAGAGCGAG ACGCCGATGA TCTCGCTGGC GGCGTCCGCG
CGCATCGTCG AGCCGATGGA CGCCAAGCGC GTGTGGGTCT TCAAGACCCC GCAGAACGAT
TCGCACATGG CGACCGCTAT TGCCGAGCAC ATGGCCAACC ATGGCGTGAA GACGGTCGCA
CTGATCGGCT TTGCCGATGC CTACGGCGAC TCGTGGGCAC AGGAGTTCGA CAAGGTGGCG
ACGTTGCGCA AGCTGCAGCT CGTCGCCAAC GAGCGCTTCG CGCGCACCGA TACCTCGGTG
ACGGGGCAGG TGCTGAAGAT CATGGCCGCC AAGCCGGACG CGGTGCTGAT CGCCGGCTCC
GGCACGCCGG CCGCGTTGCC CCAGCGTGCG CTCAAGGAGC GCGGCTATAA GGGCAAGCTG
TACCAGACCC ACGGCGTGGC CAATGCCGAC TTCCTGCGCG TGTGCGCCAA GGACTGCGAA
GGCACCTTCC TGCCCGCCGG CCCGATCCTC GTCGCCGAGC AGCTGCCCGA CAGCAACCCG
GTCAAGAAGC CGGCGCTGGC CTACAAGGTC GCGTACGAGA AAGCGTTCGG CGGCCAGGTC
TCGACGTTTG GCGGCCACAT GTGGGATGCC GGTCTGCTGC TGGCGAACGC GATGCCCGCG
GCGCTCAAGA AAGGGCAGCC CGGTACGCTG GCCTTCCGCA AGGGCCTGCG TGACGCGCTG
GAGACGACGA CCAATCTGGC CATCTCGCAT GGCGTGATGA ACATGAATGC CAAGGATCAC
CTCGGCCTCG ACCAGCGGTC GCGCGTGATG GTGGAGATCC AGGACGGCAA GTGGAAGCTG
CAGAACTGA
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| Protein sequence | MKVSRATRIA LAATAFLAST AFAQVKVGVT VSATGPGASL GIPEKNTVSL LPKEIAGKKI
EYIVLDDASD TTTAVKNTRK LITEDKVDLV IGSTITPTSL AMVDVAAESE TPMISLAASA
RIVEPMDAKR VWVFKTPQND SHMATAIAEH MANHGVKTVA LIGFADAYGD SWAQEFDKVA
TLRKLQLVAN ERFARTDTSV TGQVLKIMAA KPDAVLIAGS GTPAALPQRA LKERGYKGKL
YQTHGVANAD FLRVCAKDCE GTFLPAGPIL VAEQLPDSNP VKKPALAYKV AYEKAFGGQV
STFGGHMWDA GLLLANAMPA ALKKGQPGTL AFRKGLRDAL ETTTNLAISH GVMNMNAKDH
LGLDQRSRVM VEIQDGKWKL QN
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