Gene RSc3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3327 
SymbolgidB 
ID1222191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3589219 
End bp3589890 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID637239744 
Product16S rRNA methyltransferase GidB 
Protein accessionNP_521446 
Protein GI17548044 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0247343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.297372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA CCGCGCTGGC CGACACCCGG TCGGAACTGG AAGCCGGCGC GCGCGCGCTC 
GGCCTGCCGC TCGAGGGCGT GCAACTGGAT CGCCTGCTGG CGTACCAAGT GCTGCTCGCC
AAGTGGAATC GCGTCTACAA CCTGACCGCC ATCCGTGATG CCGGCGACAT GCTGACGCAT
CATCTGCTGG ATTCGCTGGC GGCCGTTCCG CGTATCGCGG AACTGGTGCG CCGCGTGCAG
CCCGAGGCGT CGCGTGTGCT GGATGTCGGT TCCGGCGGTG GCCTGCCCGG CATCCCGCTG
GCGATCGCGT GCCCCGACAT CGGCGTCACC ATGGTCGACA TCGTGCAGAA GAAGACCGCG
TTCTTGACGC AATGCCGCGC AGAGCTGGGC CTGACGAATG CCCAGTCGCA CTGGGGCCAC
GTGGAAAAAC TGGCCGATGC CGTCGGCTAT GGCGTCATCA CTTCGCGCGC ATTTGCCGAG
CTGAACGACT TTGTGCGGTT GGCCGGCCAT CTGCTGGCGC CGGGCGGGCG CATGGTCGCC
ATGAAAGGCG TGCGCCCGGA CGCCGAAATT GCCCGGCTGC CCGAAGGGTG GGCGGTCGAG
TCGATCGAGC GTTTGACGGT TCCGGGGCTG CCGGCCGAGC GCCACCTGGT CATCCTCGCG
CCGTCGGCGT GA
 
Protein sequence
MANTALADTR SELEAGARAL GLPLEGVQLD RLLAYQVLLA KWNRVYNLTA IRDAGDMLTH 
HLLDSLAAVP RIAELVRRVQ PEASRVLDVG SGGGLPGIPL AIACPDIGVT MVDIVQKKTA
FLTQCRAELG LTNAQSHWGH VEKLADAVGY GVITSRAFAE LNDFVRLAGH LLAPGGRMVA
MKGVRPDAEI ARLPEGWAVE SIERLTVPGL PAERHLVILA PSA