| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3323 |
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| Symbol | atpB |
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| ID | 1222187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3585422 |
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| End bp | 3586345 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637239740 |
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| Product | F0F1 ATP synthase subunit A |
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| Protein accession | NP_521442 |
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| Protein GI | 17548040 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000145119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.141872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACCGCG AAGAATGTTT CGCAATATTG GACTGGGTCA TCATGGCAAC AGAAGTCGCA
GAAGCCGCCG GCCACGCCGC CGAGCACGCT CTCACGCCTT CCGCGTATAT CGCGGAGCAC
TTGCAGAATT TCAATAGCAT CGGTGGCAAG CAGACGTCGA TCGTCGACTT CTCCGTCATC
AACTGGGACA CCATGTTCTG GTCGGTGCTG ATGGGTGCGA TCGGCCTGAT CTTCCTGGGC
ATGGCCGCGC GCCGTGTCAC CGCCGGCGTG CCGGGCCGCT TCCAGGCCTT CGTCGAGCTC
GTCGTCGAGA TGGTCGATGA CCAGGCCAAG GGCATCATCC ACGGTGACCG CACCTGGATC
GCGCCGCTGG CGCTGATGGT GTTCGTGTGG GTCACGCTGA TGAACGCGGT CGATTTGATC
CCGGTGGACT GGGTCTTTGG TATCAACCAC CTGCTGGAGT CTTTCGGCCT GCACGTGCCG
CACCACCGCG CGGTGGCCAC GGCGGATCTG AACGGCACCT TTGGCATGTC CTTCGCCGTG
CTGCTGCTGA TGATCTACTA CAGCTTCAAG ATCAAGGGCG CGGGCGGCTT TGTGCACGAG
CTGCTGTCGG CTCCGTTCGG CGCCAAGTGG TACCTCGCGC CGTTCAACCT GATCCTCAAC
ATCATCGAAT TTCTCGCCAA GGCTGTGTCG CTGGGCATGC GGTTGTTCGG CAACATGTAC
GCGGGCGAGC TGGTGTTCCT GCTGATCGCG CTGCTTGGCT CGATCTGGAC GTTCGGTGCC
GATTTCTCGG CGCTGGGTTT CGTGGGTCAC GTGGTGGCCG GTGCAGCGTG GGCGATCTTC
CACATCCTGA TCGTGCTGCT GCAAGCCTTC ATCTTCATGA TGCTGACGCT GGTGTATATC
GGCCAGGCAC ATGACCACCA TTAA
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| Protein sequence | MYREECFAIL DWVIMATEVA EAAGHAAEHA LTPSAYIAEH LQNFNSIGGK QTSIVDFSVI
NWDTMFWSVL MGAIGLIFLG MAARRVTAGV PGRFQAFVEL VVEMVDDQAK GIIHGDRTWI
APLALMVFVW VTLMNAVDLI PVDWVFGINH LLESFGLHVP HHRAVATADL NGTFGMSFAV
LLLMIYYSFK IKGAGGFVHE LLSAPFGAKW YLAPFNLILN IIEFLAKAVS LGMRLFGNMY
AGELVFLLIA LLGSIWTFGA DFSALGFVGH VVAGAAWAIF HILIVLLQAF IFMMLTLVYI
GQAHDHH
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