| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3322 |
|---|
| Symbol | atpE |
|---|
| ID | 1222186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3585075 |
|---|
| End bp | 3585341 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637239739 |
|---|
| Product | F0F1 ATP synthase subunit C |
|---|
| Protein accession | NP_521441 |
|---|
| Protein GI | 17548039 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K |
|---|
| TIGRFAM ID | [TIGR01260] ATP synthase, F0 subunit c |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000187922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.119264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAT TTCTCGCCAA CATCCAAGGT CTGACCGCCA TCGGTATCGG CATCATCATC
GGCCTGGGTG CCATCGGCGC CTGCCTCGGC ATCGCACTGA TGGGCGGCAA GTACATCGAA
GCCTGCGCAC GTCAGCCCGA GCTGATGAAC CCGCTGCAAA CCAAGATGTT CCTGCTGGCT
GGCCTGATCG ACGCGGCATT CCTGATCGGC GTGGGCGTGG CCATGCTGTT CGCGTTCGCC
AACCCGCTGC TGTCGGTCAT CAAGTAA
|
|---|
| Protein sequence | MQAFLANIQG LTAIGIGIII GLGAIGACLG IALMGGKYIE ACARQPELMN PLQTKMFLLA
GLIDAAFLIG VGVAMLFAFA NPLLSVIK
|
|---|
| |