Gene RSc3321 details

Gene Information

• Locus tag: RSc3321
• Symbol: atpF
• ID: 1222185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: -
• Start bp: 3584498
• End bp: 3584968
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637239738
• Product: F0F1 ATP synthase subunit B
• Protein accession: NP_521440
• Protein GI: 17548038
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00311324
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.130575
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACCTGA ACGCCACACT CGTCGCGCAG ATGGTCGTGT TCTTCATCCT GTGGTGGGTT 
GTTGCCAAGT TCATTTGGCC GCCCCTGGTG AAGGCGCTCG ACGAACGCGC GAAGAAAATC 
GCCGATGGCT TGGCTGCTGC CGATAAGGGC AAGGCCGAGC TGGAGCTGGC CAACAAGCGG 
GTCGAGCAGG CACTGACCGA AGCGCGCACC GAAGGCGCGC AGCGCATCGC GGACGCCGAG 
AAGCGTGCCC AGATGACCGC TGACGAGATC AAGCAGAACG CCCAGGCCGA AGCCGCGCGC 
ATCGTCGCGC AGGCCAAGGC GGAAGCCGAA CAGCAGGCCG TGCGCGTGCG TGAATCGCTG 
CGCGACCAGG TCGCCGTGCT GGCCGTCAAG GGCGCCGAGC AGATCCTCAA GCGTGAAGTC 
AATGCGCAGG TCCACGCCGA TCTGCTCACT CAACTCAAGG CTGAGCTGTA A 

 

Protein sequence

MNLNATLVAQ MVVFFILWWV VAKFIWPPLV KALDERAKKI ADGLAAADKG KAELELANKR 
VEQALTEART EGAQRIADAE KRAQMTADEI KQNAQAEAAR IVAQAKAEAE QQAVRVRESL 
RDQVAVLAVK GAEQILKREV NAQVHADLLT QLKAEL