Gene RSc3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3313 
Symbol 
ID1222177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3574787 
End bp3575248 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content72% 
IMG OID637239730 
Producthypothetical protein 
Protein accessionNP_521432 
Protein GI17548030 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.366115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.316703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA ATCCTTCCTA CGTCGACGAG CAGACGCTCA TGCGCCGGCT GCTGTCCGGC 
AAGACCATCG CCGTGGTCGG GCTGTCGCCG CGGCCGACGC GGCCCAGCTA CGACGTGGCG
CGCTATCTGC AGCAGGCCGG CTACCGGATC GTGCCCGTGA ACCCGCAGCA CGCGGGCGAG
GATGTGCTCG GCGAGCCCTG CTTCGCGACG CTCGCCGAGG CCGCCACCAC GCTGGCCGCC
GCCGGGCGGC GCATCGACCT GGTCGACATC TTCCGCCGCG CCGAACACGT GCTGCCGGTG
GTGCGTGAAG CGGCGGCCCT GGGCGTGGGC GGCATCTGGG TGCAGCTGGG CATCGTCAAC
GATGAGGCGA TGGCGGTGGC GCGCGCGGCG GGCATTCCAG CCGTGCAGGA CCGCTGTACC
AAGATCGAGC ACTGGCGCCT CGGTCTCGGC GAGCGGGGCT GA
 
Protein sequence
MSANPSYVDE QTLMRRLLSG KTIAVVGLSP RPTRPSYDVA RYLQQAGYRI VPVNPQHAGE 
DVLGEPCFAT LAEAATTLAA AGRRIDLVDI FRRAEHVLPV VREAAALGVG GIWVQLGIVN
DEAMAVARAA GIPAVQDRCT KIEHWRLGLG ERG