| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3295 |
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| Symbol | gcvP |
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| ID | 1222159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3547560 |
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| End bp | 3550508 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239712 |
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| Product | glycine dehydrogenase |
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| Protein accession | NP_521414 |
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| Protein GI | 17548012 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTC CGCACCCCGC TTCCGCGGCC CTGACCCAGA CCCTCGCCGC ACGCCCCACC
CTGGCCGAGC TGGAGGCGCG CGACGCCTTC GCCGAACGCC ACATCGGCCC GTCGCCCGAT
GAGCAGGCCG CGATGCTTGC CACCCTCGGC TACGCTAGCC GCGCCGCGCT GATCGACGCC
GTGATCCCGC CCGCCATCCG CCGCCAGGAC GGCATGCCGC TGGGCGAGTT CACCCAGCCG
CTGACGGAAG AAGCGGCGCT GGCCAAGCTG CGCGGCATCG CCGGCCAGAA CCGCGTGGTC
AGGAGCCTGA TCGGCCAGGG CTACTACGGC ACCCATACGC CGGGCGTGAT CCTGCGCAAC
ATTCTCGAGA ACCCGGCCTG GTACACCGCC TACACGCCCT ACCAGCCCGA GATCTCGCAA
GGCCGCCTGG AAGCGATGCT GAACTTCCAG CAGATGGTGA TGGACCTGAC GGCGATGGAT
ATCGCCAACG CGTCGATGCT CGACGAAGCC ACCGCCGCCG CCGAAGCGAT GACGCTGCTG
CAGCGCGTGG GCAAGCACCC GTCCAACGTC TTCTTCGTGG CTGACGACGT GCTGCCGCAG
ACGCTGGACG TGGTGCGCAC GCGCGCCGAG CCGATCGGCG TACAGGTCGT GACCGGTCCG
GCCGCCGACG CCGCCAAGCA CAACGCCTTC GGCGTGCTGC TGCAGTATCC GGGCACCGGC
GGCGCGCTGC TGGGTGGGCT GTCGACGTAC CAGGCGCTGA CCGACGCCGT GCACGCTGCC
GGCGGCCTGG TCGTTGCCGC GGCCGACCTG CTGGCGCTGA CGCTGCTGGC CGCTCCGGGC
GAATGGGGCG CCGACGTGGT GATCGGCAAC ACGCAGCGCT TCGGCGTGCC GTTCGGCTTC
GGCGGCCCGC ACGCCGGCTA CATGGCCGTG CGCGATGCGT TCAAGCGCTC AATGCCCGGC
CGCCTGGTGG GCGTGACGGT CGATGCGCAG GGCAACCCGG CCTACCGCCT CGCGCTGCAG
ACGCGCGAGC AGCACATCCG CCGCGAGAAG GCCACCTCCA ATATCTGCAC CGCGCAGGTG
CTGCTGGGCG TGATGGCGTC GATGTACGCC GTCTACCACG GCCCGCAGGG CCTCAAGCGC
ATCGCCCAGC GCGTGCACCG CCTGACCGCC ACGCTGGCCG CCGGCCTGCG CCAGATCGGC
TACACGCTGG AGGCCGGTGC CTTCTTCGAC ACGCTGACCG TCGCCACCGG CCCGCGCACC
GCCAACCTGC ACATCGCCGC GCAGGCGCAC GGGTTCAACC TGCGCCAGAT CGATGACGGC
CGCCTGGGCG TCTCGCTGGA CGAGACCGTC ACGCGCGCCG AAGTGGTGGC GCTGTGGGAG
ATCTTCGCGC ACGCCGCCCA TGCGGGCGCA CCGGATTTCG ACCAGGTCGA GGCCGGCATC
GCCGATGCCT TCCCCGCCTC GCTGGCGCGC CAGAGCGCGT ACCTGACGCA CCCCGTCTTC
AACGCGCACC ACTCCGAACA CGAAATGCTG CGCTACCTGC GCAGCCTGGC CGACAAGGAC
CTGGCGCTGG ACCGCACCAT GATCCCGCTC GGCTCGTGCA CGATGAAGCT CAACGCCACC
GCCGAGATGC TGCCGGTGAC GTGGCCCGAG TTTGCCAACA TCCACCCGTT CGCGCCGGCC
GACCAGACCG TGGGCTACCG CGAGATGATC GACCAGCTCG AGCAGATGCT GTGCGCCGCC
ACCGGCTATG CGGCCGTGAG CCTGCAGCCG AACGCCGGCT CGCAGGGCGA GTACGCCGGC
CTGCTGATCA TCCACGCCTA CCACGCCAGC CGTGGCGAGA GCCATCGCGA CGTGTGCCTG
ATCCCGTCGT CCGCGCACGG CACCAACCCG GCCTCGGCAC AGATGGCCGG CATGAAGGTG
GTGGTGGTCG CGTGCGACGA GCGCGGCAAC GTGGACCTGG CCGACCTGGA AAAGAAAGCG
GCCGAGCACA GCGCCAACCT GGCGGCCATC ATGATCACCT ACCCGTCCAC GCACGGCGTG
TTCGAGGAAG GTGTGAAGCG CGTCTGCGAG ATCGTGCACA GCCACGGCGG CCAGGTGTAC
GTGGACGGCG CCAACATGAA CGCCATGGTC GGCACCGCCG CGCCGGGCCA CTTCGGCGGC
GACGTGTCGC ACCTGAACCT GCACAAGACG TTCTGCATTC CGCACGGCGG CGGCGGCCCG
GGCGTGGGCC CGGTGGCGGT GGGCGCGCAC CTCGCGCCGT TCCTGCCCGG CCGCGCGGCC
TCGGGCGAAG ACGCCAGCCA GAACATCGGC GCGGTGTCGG CGGCCCCGTT CGGCTCCGCG
TCGATCCTGC CGATCTCGTG GATGTACATC GCCATGATGG GCGCGGCCGG CCTGACCGCC
GCCACCGAGG CGGCCATCCT GTCGGCCAAT TACGTGGCCC GCCGCCTCTC GCCGTACTAC
CCGGTGCTGT ACACCGGCGC GCACGGCCTG GTGGCGCACG AGTGCATTCT CGACATCCGC
CCGCTGCAGA AGGAGTCGGG CATCAGCAAC GAAGACATCG CCAAGCGCCT GATGGACTTC
GGCTTCCACG CGCCGACCAT GAGTTTCCCG GTGCCGGGCA CGCTGATGAT CGAGCCGACC
GAGAGCGAGC CCAAGGTGGA ACTCGACCGC TTCATCGACG CGATGATCGC CATCCGCGGC
GAAGTCGACC AGGTGATCTC GGGCGCGTTC GACCGCGAAG ACAACCCGCT CAAGCACGCG
CCGCACACCG CCCAGGTGGT GATGGCCGAC GACTGGTCGC ACCGGTACAC GCGCGAGCAG
GCCGCCTACC CGGTGGCCTC GCTGCGCACG CGCAAGTACT GGCCGCCGGT CGGCCGCGCC
GACAACGTCT ACGGCGACCG CAACCTGTTC TGCGCCTGCG TGCCGATGAG CGAGTACGCG
CAGGACTGA
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| Protein sequence | MNAPHPASAA LTQTLAARPT LAELEARDAF AERHIGPSPD EQAAMLATLG YASRAALIDA
VIPPAIRRQD GMPLGEFTQP LTEEAALAKL RGIAGQNRVV RSLIGQGYYG THTPGVILRN
ILENPAWYTA YTPYQPEISQ GRLEAMLNFQ QMVMDLTAMD IANASMLDEA TAAAEAMTLL
QRVGKHPSNV FFVADDVLPQ TLDVVRTRAE PIGVQVVTGP AADAAKHNAF GVLLQYPGTG
GALLGGLSTY QALTDAVHAA GGLVVAAADL LALTLLAAPG EWGADVVIGN TQRFGVPFGF
GGPHAGYMAV RDAFKRSMPG RLVGVTVDAQ GNPAYRLALQ TREQHIRREK ATSNICTAQV
LLGVMASMYA VYHGPQGLKR IAQRVHRLTA TLAAGLRQIG YTLEAGAFFD TLTVATGPRT
ANLHIAAQAH GFNLRQIDDG RLGVSLDETV TRAEVVALWE IFAHAAHAGA PDFDQVEAGI
ADAFPASLAR QSAYLTHPVF NAHHSEHEML RYLRSLADKD LALDRTMIPL GSCTMKLNAT
AEMLPVTWPE FANIHPFAPA DQTVGYREMI DQLEQMLCAA TGYAAVSLQP NAGSQGEYAG
LLIIHAYHAS RGESHRDVCL IPSSAHGTNP ASAQMAGMKV VVVACDERGN VDLADLEKKA
AEHSANLAAI MITYPSTHGV FEEGVKRVCE IVHSHGGQVY VDGANMNAMV GTAAPGHFGG
DVSHLNLHKT FCIPHGGGGP GVGPVAVGAH LAPFLPGRAA SGEDASQNIG AVSAAPFGSA
SILPISWMYI AMMGAAGLTA ATEAAILSAN YVARRLSPYY PVLYTGAHGL VAHECILDIR
PLQKESGISN EDIAKRLMDF GFHAPTMSFP VPGTLMIEPT ESEPKVELDR FIDAMIAIRG
EVDQVISGAF DREDNPLKHA PHTAQVVMAD DWSHRYTREQ AAYPVASLRT RKYWPPVGRA
DNVYGDRNLF CACVPMSEYA QD
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