| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3289 |
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| Symbol | rep |
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| ID | 1222153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3540395 |
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| End bp | 3542512 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239706 |
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| Product | ATP-dependent DNA helicase REP protein |
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| Protein accession | NP_521408 |
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| Protein GI | 17548006 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCG GTCTTGCCCA CGGGCTCAAT GCTGCCCAAT CCGAAGGTGT GCACTACCTC
GATGGTCCGT GCCTGGTGCT GGCGGGCGCG GGCTCCGGCA AGACCCGGGT GATCACGCAG
AAGATCGCGC ACCTGATCCT GGACAAGGGC TTCGAGCCGC GCCACATCGC CGCCGTCACC
TTCACCAACA AGGCGGCCAA GGAAATGCAG GAGCGCGTGG CCAAGCTGAT GGACGGCAAG
ACGCGCGAGG ACGGCAAGCG CATCCCCATC AAGCAGCTGA CGGTGTGTAC CTTCCACTCG
CTGGGCGTGC AGATCCTGCG CGCGGAGGCC GAGCACGTGG GCCTGAAGCC GCGCTTCTCG
ATCATGGATT CGGACGATTG CTTCGGCCTG ATCCAGGAGC AGCTGGCGAC GACGGACAAG
CAGCTGATCC GCCGCGTGCA GAGCGCGATC TCGCTGTGGA AGAACGGTCT CGTCGATCCG
GAGGCCGCCA TCGCCGAGGC CATCGCCAAC AACAACGCCG ACGACCACCA GGCCGCGCTG
GTCTACCGCA ACTACGTCGC CACGCTGCAT GCCTACCAGG CGGTGGATTT CGACGACCTG
ATCCGCATCC CGGCCGAGCT GTTCGCGCGC AACGAAGACG TGCGCCTGAA GTGGCAGAAC
CGCCTGCGCT ACTTCCTCGT CGACGAATAC CAGGACACCA ACGCCTGCCA GTACCAGCTG
CTCAAGCTGC TGGCCGGCGG CTCGCACCTG CGCGCGCCGG CCTTCACGGC GGTGGGCGAC
GACGACCAGG CGATCTACGG CTGGCGCGGC GCGACGCTGG ACAACCTCAA GCTGCTGCAG
ACCGATTTCC CCAGCCTGAA GGTCATCAAG CTGGAACAGA ACTACCGCTC CACCGTGCGC
ATCCTGAACG CCGCCAACGC GGTGATCGCG CAGAACCCCA AGCTGTTCGA AAAAACGCTG
TGGAGCGAGC ACGGCATGGG CGATGCGATC AACGTGTCGG GCGCCAACGA TGAGGAGCAC
GAGGCCGAGA GCGTGGTGTT CAAGCTCTCC GCGCACAAGT TCGAGCGGCG CGCGCAGTTC
CGCGACTACG CCATCCTGTA CCGCGGCAAT TTCCAGGCGC GGCTGTTCGA GCAGATCCTG
CGGCGCGAGC GCATTCCGTA TGTGCTCTCG GGCGGCCAGA GCTTCTTCGA CAAGGCCGAG
ATCAAGGACC TGTGCGCCTA CCTGCGCCTG ATCGCCAACG CCGACGACGA TCCCGCCTTC
ATCCGCGCCG TCACCACGCC CAAGCGCGGC GTGGGCAACG CGACGCTGGA GGTGCTCGGC
GCGTTCGCGG GGCAGGCCAA GGTATCGCTG TTCGAGGCGG CGATGATGGG CGGCATCGAG
GCCAAGCTGG CGCCGCGCCA GCTGGAGCCG CTGCGGGTGT TCTGCGAATT CATCGTCCGC
CTGTCGGACC GCGCCGCGCG CGAGCCGGCC AGCACGCTGC TCGACGAGAT GATGGGCGGC
ATCCACTACG AGGCCTACCT GTACGACACC TACGACGAGC GCCAGGCCCA GAACAAGTGG
ACCAACGTGC TGGAGTTCCT CGACTGGCTC AAGCGCAAGG GCACCAAGCC GGAGAACCTC
GAAGCCGAGG AGGCCACCGG CTACGACAAC GCCGACGGCC TGATGGATAC CGGCAAGAAC
CTGCTGGAGC TCACGCAGAC CATCGCGCTC ATCAGCATGC TCGAAGGCAA GGAGGAGGAC
CCGGACGCGG TGCGCCTGTC CACGCTGCAT GCGAGCAAGG GCCTAGAGTA TCCGCACGTG
TTCCTGGTGG GCGTGGAAGA GGGCATCCTG CCCCACTGCC GCGAAGACGA CGACCTGACC
GACGAGAAGA TCGAGGAAGA GCGCCGCCTC ATGTACGTCG GCATCACCCG CGCCCAGCGC
AGCCTGCATA TCACCTGGTG CAAGAGGCGC AAGCGCGCGC GAGAGACCGT GGTGTGCGAA
CCGTCGCGCT TCATCGCCGA GATGAAGCTG GGCGACGACG CCGGCCCGAC CCCGGAAGAC
ACCATGCCCG CCATGTCGCC GAAGGACCGC CTCGGGGCAC TCAAGGGCCT GCTGGCCGCA
AAGAAGACCG CGGCGTAA
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| Protein sequence | MSSGLAHGLN AAQSEGVHYL DGPCLVLAGA GSGKTRVITQ KIAHLILDKG FEPRHIAAVT
FTNKAAKEMQ ERVAKLMDGK TREDGKRIPI KQLTVCTFHS LGVQILRAEA EHVGLKPRFS
IMDSDDCFGL IQEQLATTDK QLIRRVQSAI SLWKNGLVDP EAAIAEAIAN NNADDHQAAL
VYRNYVATLH AYQAVDFDDL IRIPAELFAR NEDVRLKWQN RLRYFLVDEY QDTNACQYQL
LKLLAGGSHL RAPAFTAVGD DDQAIYGWRG ATLDNLKLLQ TDFPSLKVIK LEQNYRSTVR
ILNAANAVIA QNPKLFEKTL WSEHGMGDAI NVSGANDEEH EAESVVFKLS AHKFERRAQF
RDYAILYRGN FQARLFEQIL RRERIPYVLS GGQSFFDKAE IKDLCAYLRL IANADDDPAF
IRAVTTPKRG VGNATLEVLG AFAGQAKVSL FEAAMMGGIE AKLAPRQLEP LRVFCEFIVR
LSDRAAREPA STLLDEMMGG IHYEAYLYDT YDERQAQNKW TNVLEFLDWL KRKGTKPENL
EAEEATGYDN ADGLMDTGKN LLELTQTIAL ISMLEGKEED PDAVRLSTLH ASKGLEYPHV
FLVGVEEGIL PHCREDDDLT DEKIEEERRL MYVGITRAQR SLHITWCKRR KRARETVVCE
PSRFIAEMKL GDDAGPTPED TMPAMSPKDR LGALKGLLAA KKTAA
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