| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3286 |
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| Symbol | solI |
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| ID | 1222150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3537741 |
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| End bp | 3538355 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637239703 |
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| Product | autoinducer synthesis protein SOLI |
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| Protein accession | NP_521405 |
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| Protein GI | 17548003 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.498186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGACAT TCATTCATGG CGGCGGGCGG CTGCCCGAAG CCGTCGATGC GGCGCTTGCG
CACTATCGCC ACCAGATCTT CGTCGGGCAG CTCGGCTGGC AGCTGCCCAT GGCCGACGGC
AGGTTCGAGC GCGACCAATA CGACCGCGAC GACACGGTCT ATGTCGTCGC CCGCGATGCG
GACGGGGCCA TCTGCGGCTG CGCGCGCCTG CTGCCGACCA CGCGGCCCTA TCTGCTCAAG
GACGTGTTCG CGCCGCTGCT GATGCGCGGC GTGCCGGCGC CGGAGTCGCC GGGGGTGTGG
GAGCTCTCGC GCTTCGCGGC GCGTTCCGGC GCGTCCCGCG CGCGGGGCGC GCGACCGGAC
TGGGCCGTAC GGCCGATGCT CGCTTCCGTG GTGCAATGCG CGGCGCAGCG CGGGGCGCGG
CGACTGATCG GCGTGACCTT TGTCAGCATG GTCCGGCTGT TCCGCCGCAT CGGCGTGCGG
GCCCATCATG CCGGCCCGGT GCGCTGCATC GGCGGCCGGC CGGTCGTGGC GTGCTGGATC
GACATCGACG CGTCGACCTG TGCCGCGCTG GGCATCCCGG GCGCGTCCGT CGTGCCGGGC
CCGGCATTGC AGTAG
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| Protein sequence | MQTFIHGGGR LPEAVDAALA HYRHQIFVGQ LGWQLPMADG RFERDQYDRD DTVYVVARDA
DGAICGCARL LPTTRPYLLK DVFAPLLMRG VPAPESPGVW ELSRFAARSG ASRARGARPD
WAVRPMLASV VQCAAQRGAR RLIGVTFVSM VRLFRRIGVR AHHAGPVRCI GGRPVVACWI
DIDASTCAAL GIPGASVVPG PALQ
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