Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3268 |
Symbol | |
ID | 1222132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3519959 |
End bp | 3520633 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239685 |
Product | hypothetical protein |
Protein accession | NP_521387 |
Protein GI | 17547985 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCACAA AAAACCACAT GAAAGTCGTC GTCGTCCCGG TTACGCCGTT TGAACAGAAC TGCACGCTGC TGATCGGCGA CGACGGGCGC GCCGCCGTCA CCGACCCCGG CGGCGACATC GACCGCATCC TGAGCGCGGC CCGCCAGCAA GGCGCCCGCA TCGAAAAGAT CCTGCTCACG CACGGCCACG TGGACCACTG CGCCGCCGCC GACGCCCTGC GCACCCAGCT CGGCGTACCC ATCGAAGGGC CGCACAGGGA CGAGGCGTTC TGGATCGACC AACTGCCGAC GCAAAGCCAG CGCTTCGGCT TCCCGCCCGC CCGCGCCTTC GTGCCCGACC GCTGGCTGGA CGACGGCGAC ACGGTGGAAG CCGCCGGCCG CACGCTCGAA GTGTTCCACT GCCCCGGCCA CACGCCGGGC CACGTGGTCT TCTTCAGCCG GCCGGACCGC ATCGCCATCG TCGGCGACGT GCTGTTCGCG GGCTCGATCG GCCGCACGGA TTTTCCGCGC GGCAACCACG CGGACCTGAT CCGCTCGATC CGCACCAAGC TGTGGCCGCT CGGCGACGAT GTGACCTTCG TGCCGGGCCA CGGCCCCGTT TCCACCTTCG GCGACGAGCG CGCGACCAAT CCGTATGTCG CCGACCGCCT GTTCGCCGAT GAGGGCACCG CATGA
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Protein sequence | MCTKNHMKVV VVPVTPFEQN CTLLIGDDGR AAVTDPGGDI DRILSAARQQ GARIEKILLT HGHVDHCAAA DALRTQLGVP IEGPHRDEAF WIDQLPTQSQ RFGFPPARAF VPDRWLDDGD TVEAAGRTLE VFHCPGHTPG HVVFFSRPDR IAIVGDVLFA GSIGRTDFPR GNHADLIRSI RTKLWPLGDD VTFVPGHGPV STFGDERATN PYVADRLFAD EGTA
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