Gene RSc3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3268 
Symbol 
ID1222132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3519959 
End bp3520633 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID637239685 
Producthypothetical protein 
Protein accessionNP_521387 
Protein GI17547985 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCACAA AAAACCACAT GAAAGTCGTC GTCGTCCCGG TTACGCCGTT TGAACAGAAC 
TGCACGCTGC TGATCGGCGA CGACGGGCGC GCCGCCGTCA CCGACCCCGG CGGCGACATC
GACCGCATCC TGAGCGCGGC CCGCCAGCAA GGCGCCCGCA TCGAAAAGAT CCTGCTCACG
CACGGCCACG TGGACCACTG CGCCGCCGCC GACGCCCTGC GCACCCAGCT CGGCGTACCC
ATCGAAGGGC CGCACAGGGA CGAGGCGTTC TGGATCGACC AACTGCCGAC GCAAAGCCAG
CGCTTCGGCT TCCCGCCCGC CCGCGCCTTC GTGCCCGACC GCTGGCTGGA CGACGGCGAC
ACGGTGGAAG CCGCCGGCCG CACGCTCGAA GTGTTCCACT GCCCCGGCCA CACGCCGGGC
CACGTGGTCT TCTTCAGCCG GCCGGACCGC ATCGCCATCG TCGGCGACGT GCTGTTCGCG
GGCTCGATCG GCCGCACGGA TTTTCCGCGC GGCAACCACG CGGACCTGAT CCGCTCGATC
CGCACCAAGC TGTGGCCGCT CGGCGACGAT GTGACCTTCG TGCCGGGCCA CGGCCCCGTT
TCCACCTTCG GCGACGAGCG CGCGACCAAT CCGTATGTCG CCGACCGCCT GTTCGCCGAT
GAGGGCACCG CATGA
 
Protein sequence
MCTKNHMKVV VVPVTPFEQN CTLLIGDDGR AAVTDPGGDI DRILSAARQQ GARIEKILLT 
HGHVDHCAAA DALRTQLGVP IEGPHRDEAF WIDQLPTQSQ RFGFPPARAF VPDRWLDDGD
TVEAAGRTLE VFHCPGHTPG HVVFFSRPDR IAIVGDVLFA GSIGRTDFPR GNHADLIRSI
RTKLWPLGDD VTFVPGHGPV STFGDERATN PYVADRLFAD EGTA