| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3262 |
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| Symbol | soxF |
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| ID | 1222126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3515107 |
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| End bp | 3516402 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637239679 |
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| Product | sulfide dehydrogenase flavocytochrome C oxidoreductase protein |
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| Protein accession | NP_521381 |
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| Protein GI | 17547979 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCT CCCGCTTTCG CAAGGACCGG CGCGCCACGC TGCGCGCCAT CGGGGCGACC
GCGCTGGCCG GACCGCTGGC GGCCTGCGCC TCGCTGCCGA GCATACGCAA TGCGCGGGTG
GTGGTGGTCG GCGGCGGGTA CGGCGGGGCG ACGGCGGCCA AATATGTGCG CGTGTTCTCC
GGCGGGCGCG TCGACGTGAC GCTGGTCGAA CCCAGCGCGG CCTTCGTATC GTGCCCGCTG
TCCAATCTGG TGCTGTCGGG CGACCGCGAT CTCGCCTCGC TGACGGTGCC GTATGACGCG
CTGGTCGCGC GCCACGGCGT GCGCTGGGTA CGCGACCGCG CCACGGCCAT CGACATCGGC
GCCCGGCAGG TGCGCCTGGC CGGCGGCGGC ACGCTGGATT ACGACCGGCT GATCCTGTCG
CCGGGCATCG ACTTCGTGCC GGGCGCGATC CCCGGCCTGG CCGACGCCGC CACCGACGCG
CGGGCGCCGC ACGCATGGAA AGCCGGCGCC CAGACGCTGG CGCTGCGCCA CCGGCTCGAG
GCCATGCCCA ACGGCGGCGT GGTGGCGATC AGCATCCCGC TCGCGCCATA CCGCTGCCCG
CCGGCGCCCT ACGAGCGCGC CTGCCTGATC GCCCACTGGC TGCAGCGCGC CCGGCCCGCG
TCGCGCGTGC TGATCCTCGA CGCCAACGAC GACGTGACCT CCAAGGGCGC GCTGTTCAAG
CGCGTATGGG CGCAGCGCTA CCCCGACCAC ATCGAATACC GGCCGCAATA CAACGCCGTG
GATATCGATG CGGCCGGCCG CGTGCTCAAG TTCGATGTGC AGGACGACGT CGAAGCCGAC
GTCGTCAATC TGATCCCGCC GCAGCGTGCC GGGGCGATCG CCGTTGCCGC CGGGCTGGCG
ACCGCCAACG GGCGTTGGTG CGAGGTCGAT TTCCTGACCT TCGAATCGAA GGTGGCGCCG
GGCGTGCACG TGATCGGCGA TGCCATCCAG ACCGCGCCGC TGATGCCCAA GTCGGGCCAC
ATGGCCAACC AGCATGGCAA GGTGGCCGCC GCCGCGGTGG TGGCGCTGCT GGCCGGCCGC
GCGCCCGATC CGTCGCCGCT GTATGCCAAC ACCTGCTACA GCTTCACCGC GCCCGACGAG
GCAATGCATG TCGCGACCGT CCACCGCTAC GACACCGCAG AACGCACCAT GGTGACCGTG
CCGGGCGCGG GCGGGCTGTC GGATGCGCCC TCGGTGGCGG AAGGCAACCT AGCGCAGGGC
TGGAGCCGCG CGATCTGGTC GGACATGCTG GGCTGA
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| Protein sequence | MSGSRFRKDR RATLRAIGAT ALAGPLAACA SLPSIRNARV VVVGGGYGGA TAAKYVRVFS
GGRVDVTLVE PSAAFVSCPL SNLVLSGDRD LASLTVPYDA LVARHGVRWV RDRATAIDIG
ARQVRLAGGG TLDYDRLILS PGIDFVPGAI PGLADAATDA RAPHAWKAGA QTLALRHRLE
AMPNGGVVAI SIPLAPYRCP PAPYERACLI AHWLQRARPA SRVLILDAND DVTSKGALFK
RVWAQRYPDH IEYRPQYNAV DIDAAGRVLK FDVQDDVEAD VVNLIPPQRA GAIAVAAGLA
TANGRWCEVD FLTFESKVAP GVHVIGDAIQ TAPLMPKSGH MANQHGKVAA AAVVALLAGR
APDPSPLYAN TCYSFTAPDE AMHVATVHRY DTAERTMVTV PGAGGLSDAP SVAEGNLAQG
WSRAIWSDML G
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