Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3234 |
Symbol | |
ID | 1222097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3492382 |
End bp | 3493029 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239652 |
Product | hypothetical protein |
Protein accession | NP_521355 |
Protein GI | 17547953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.014257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCG CAATGACCTA CAACGCCAAC CCGTGGCAAG ACTTCAACGA CGCTGACCAG CAGCAAGGTT TCGACCTGAT CCCGAAAGGC ACGCTGGTGC CGGTGCGCAT GATCCTCAAG CCGGGCGGCT ATGACGATCC CTCCCAGGGC TGGGTGGGCG GCTACGCGAG CGAGTCGTTC GAGACCGGCT CGGTCTACCT GGCCGCCGAG TTCGTCGTGA CCGGTGGCGA GCACGCCAAG CGCAAGCTGT GGAGCAACAT CGGCCTGCAC TCGCCCAAGG GCGCGACCTG GGGCCAGATG GGGCGCAGCT TCGTGCGTGC GGCGCTCAAC AGCGCCCGCA ACGTCCACCC GCAGGACAAC TCGCCGCAGG CCGCCGCCGC GCGCCGTATC CAGGGTTTCC ACGAGCTCGA CGGGCTGGAG TTCATCGTCC GCGTCGACAT CGAAAAGGAT CCCAAGGGCG AGGACCGCAA CGTGATCCGG CTCGCCATCG AGCCCGACCA CCCGGAATAC GCCCGGCTCA AGGGCGTGCC GCCCAAGACC AACCCCGGTG GAGGCACGTC TGGCGCACCC GCGCAGCCTG TGCCGTCCCG TGCCGCGCCC ACCGCGCAGC GCGCGCCCGT GACCGGCAAG CCCGCCTGGG CCCAGTGA
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Protein sequence | MNTAMTYNAN PWQDFNDADQ QQGFDLIPKG TLVPVRMILK PGGYDDPSQG WVGGYASESF ETGSVYLAAE FVVTGGEHAK RKLWSNIGLH SPKGATWGQM GRSFVRAALN SARNVHPQDN SPQAAAARRI QGFHELDGLE FIVRVDIEKD PKGEDRNVIR LAIEPDHPEY ARLKGVPPKT NPGGGTSGAP AQPVPSRAAP TAQRAPVTGK PAWAQ
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