| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3228 |
|---|
| Symbol | |
|---|
| ID | 1222091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3487429 |
|---|
| End bp | 3487893 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637239646 |
|---|
| Product | putative bacteriophage-related protein |
|---|
| Protein accession | NP_521349 |
|---|
| Protein GI | 17547947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000377151 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTACGA CCATTCTCGC CCTGGATTTG GGCACCAAGA CCGGCTGGGC GCTGCAATAC
CTGGACGGCA GCATCACCAG CGGCACGCAG GATTTCAAGC CGAAGCGCTT CGAAGGCGGT
GGTATGCGCT TCCTACGCTT CAAGCGCTGG CTCAACGAGC TGAAGCTCTC CTGCAGCGAT
ATCAACGTGG TGTATTTCGA GGAGGTGCGC CGGCACGCGG GCGTGGACGC CGCCCACATC
TATGGCGGTC TGCTCGGACA CCTGAGCGCC TGGTGCGAGC ACCACAACAT TCCGTACATC
GGCGTTCCGG TCGGCACGAT CAAGAAGCAT GCGACCGGCA AGGGCAACGC GAGCAAAGAC
GAGATCATCG CGTCCGTCAG CAAGCGCGGC CATGAGCCAA CCGACGACAA CGAAGCCGAC
GCCCTGGCGA TCCTGTACTG GGCGGCCGAG ACGCAGGAGG CGTGA
|
|---|
| Protein sequence | MTTTILALDL GTKTGWALQY LDGSITSGTQ DFKPKRFEGG GMRFLRFKRW LNELKLSCSD
INVVYFEEVR RHAGVDAAHI YGGLLGHLSA WCEHHNIPYI GVPVGTIKKH ATGKGNASKD
EIIASVSKRG HEPTDDNEAD ALAILYWAAE TQEA
|
|---|
| |