| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3222 |
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| Symbol | |
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| ID | 1222085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3483721 |
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| End bp | 3485364 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637239640 |
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| Product | putative VGR-related protein |
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| Protein accession | NP_521343 |
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| Protein GI | 17547941 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000721759 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGCAAA TCGACTTGCA AAGAGCGCTC ACCCAGAACC GCCGCGCCAT GCGCCTGGAT
TTCGGCCACA CCGCGAACGC TGCCGCTCAA ACGCTGGTGC CGCAATACGC CGATATCCGC
CAAGGCCTCT GCGCCGGCCT TCAGGCCCAG GTGATCTGCC TGTCGGAGCA TCCTGATTTG
CCGCAGCAGG ATCTGCTCGG CGTGCCCGTG TCAATCCAAC TGGCGACGAA CGAGGGCGTG
CTGTACCCGA TCAACGGGGT CATCACGGAC ATACAGTCCG GCCAGTCCGA TGGCACGCTC
ACGAGTTACC GGCTCACGGT CGGTGACGCC ATGTCGCTGA TGCGCGGGCG CCGGAACATG
CGCACCTTCG TCGGAAAGAG CGTGCCCGAG ATTCTGGAAA CGATGCTGGG CGAGTGGCAA
CAGCGCAGTG CCGCCATGGA CCGTGTATTC GATTTCGAGC TGTTGCTCGA CCGTGGACGC
TACCCAAAGC GTGCGCAAAC GCTCCAGCTG GACGAGTCGG ACTACGGCTT TCTCGATCGC
ATGACGCGGC ACGACGGCAT CTGGTGTTTC GTCAAGGCCG GCACGCGCGA CGGCTCCGCC
AGCAACGCGC CCGTGCACAC ACTAGTGTTC TGCGACGATC CGATGCGCCT GCCGCAGTCG
GCAGCGGGCA CGGTGCCCTA CCACTACGGC GCCGCCGTCA AGGAGCGCGA TTCGATCACC
CGCTGGAGCG AGGCGCGCAG CCTGATTCCC GGCGCCATCC GGGGCACGAG CCCCGATCAT
GAAACCGGCA AGGTGGATCG GGTCGAAGTC GATACGATGC TCGATCAGGG CAAAGCCGGC
AACGACCTCG CGCGCCTGAT GACGGATGCG GCCGTCGACC GGCCGCACGC GGGCAATTCG
CGCGAGGACT ACCAGCGCGT AGGCAAGCTG CGCATGCAGG CACACGAGCG CCGCGCCGCG
TGCGTGCATG CGGCCAGCGA CGTGCGCAAC CTGACGCCCG GTTTCTGGTT CACATTGCGC
GGCCATCGGC AGGTGGACCG GCGCGAGGCG AGACAGCGCG AGTTCGTGGT CACCGGCCAG
CACCAGCAGG TCATCAACAA CTTTCCAAAG GCGTTGGGCG AACAGGCGCG GGCGCTAGCT
GAGGCCAGCG GCTGGCACAT CGAGATGCGC TCAGAGCCCG TTTGGAAATT CAACGATGAG
CGATTCTGCG CAGTAGCAAG CCGCTCATCG CGATATGAAT CATGGCTTCC GAGACGTCCG
CGCGCTGCTC GTAGTCGCGT ACGAGTCGGC GCCAGCGAAC CATCCACCCA AAGGTGCGCT
CGACCACCCA GCGGCGCGGC AGAACGGCAA AGCCCGTTTG CTGCTCGTGC CGGCGCACCA
CCTCAACCAC GAAGTCGAGG GTCGCGGCCC TGTCCATCAG CGCCGTGCGG TCGTAGGCGC
CGTCTGCGAA CAGGTGTTTC ACACCCGGCC AGCGCTTCTT CACCGCTTCC AGCACCGCCA
GTGCCCCCGT GCTGTCGGCA ATATCCGCCG ACGTCAGGTT CACCATCAGC AGCCGTCCAT
CCGTGTCCAC CGCGATATGC CGCTTGCGCC CGACGATTTT CTTGGCCGCG TCGTAGCCAC
GCTTGTCGGC CGAGGGCGCT TTGA
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| Protein sequence | MQQIDLQRAL TQNRRAMRLD FGHTANAAAQ TLVPQYADIR QGLCAGLQAQ VICLSEHPDL
PQQDLLGVPV SIQLATNEGV LYPINGVITD IQSGQSDGTL TSYRLTVGDA MSLMRGRRNM
RTFVGKSVPE ILETMLGEWQ QRSAAMDRVF DFELLLDRGR YPKRAQTLQL DESDYGFLDR
MTRHDGIWCF VKAGTRDGSA SNAPVHTLVF CDDPMRLPQS AAGTVPYHYG AAVKERDSIT
RWSEARSLIP GAIRGTSPDH ETGKVDRVEV DTMLDQGKAG NDLARLMTDA AVDRPHAGNS
REDYQRVGKL RMQAHERRAA CVHAASDVRN LTPGFWFTLR GHRQVDRREA RQREFVVTGQ
HQQVINNFPK ALGEQARALA EASGWHIEMR SEPVWKFNDE RFCAVASRSS RYESWLPRRP
RAARSRVRVG ASEPSTQRCA RPPSGAAERQ SPFAARAGAP PQPRSRGSRP CPSAPCGRRR
RLRTGVSHPA SASSPLPAPP VPPCCRQYPP TSGSPSAAVH PCPPRYAACA RRFSWPRRSH
ACRPRAL
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