| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3220 |
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| Symbol | |
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| ID | 1222083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3481757 |
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| End bp | 3483286 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239638 |
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| Product | putative VGR-related protein |
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| Protein accession | NP_521341 |
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| Protein GI | 17547939 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00376065 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGCTATG AGAACACCTT CACCTGCGTG CTGCGCGGTG TGCCACTGAC CCCTGACTAC
GACCCCCGCA TCGACTTGCC GCGTACCGAG CCGATGAGCG CTGTGGTCGT CGGCCCGCAA
GGCGAGGAAG TGCACTGCGA TGCGATGGGC CGCTACAAGC TGCAATTCGT CGGGCTGCAC
GCCGAAGACC ACGCACACGC GCAAGGCGCG GGCACCAGTG GCACCGATCG GGACAGCGCC
TGGGTGCGGG CGGGCAACCT CTGGGCGGGG CAGCAGTACG GCATCAACAT GCCGCTGCGC
GCGGGGATGG AGGTGCTCGT GGCCTTCGCC AACGGCAACC CCGACCGGCC GTACATCACG
GCCGTCCTGC CGGGGTGGAA CAACATGCCG GCTACGTTCA GTAACACGGG TTCGCTGCCC
GGCAACCGGT ACGTGTCCGG GATCAAGACC CAGGAGATCA AAGGCCCGGG CCACAACCAG
CTCCGCCTGG ACGATACGTC CGGCCAGATC AGCGGCCAGC TTGCCAGCAC GCATGCCCAC
AGCCAACTCA ATCTTGGCTA TCTGACCCAC CCGCGCGAGG AAGGCCAGGG CACGCCACGC
GGCGAAGGGC TGGAGGCGCG CAGCGATGCC CACGTGGCCG TGCGCAGCGG CATGGCGATG
CTGCTATCAG CGTGGCAGCG CCTGAAGGCC AGCGGCGAGC AACTGGAGCG CGCGGAATAT
CTGCAATTGA TGCAGGACAG CCTGGACCTG TTCAAGAGCC TGGGCGACTA CGCTGAACAA
CATCAGGGTG TTGCGATGGA CACGCAGCCG CAGGGCGCGC TGGCCGCCAC CATCAAGGGC
TGGCCCGACC AGCCGGGCAC CACGCAGGGT GACCCCGCCG CGCAGGCCGC CATCGGCATC
ACCGCGCCGG CCGGCATCAG CCTGGCGACG CCCAAGGCCG TGGTGACCTA TGCCGGCAGC
AACGTCGATA CCGTTGCACA GAAGCATGTG CAGATCACCA GCGGCGAGCG CACCAACCTG
CATGCGGGCG GCGGTCTGTC GCTCTTTGCG CATCAGGACG GCATCTCGGC CATTGCCAAC
CAGGGCAAGC TGCGCCTGCA GAGCCAGGCC GACGACACGC TGATCGACTC GGCCAAGAAC
ATCCACTGGA CAGCCGTGGA CGGCAAGCTC GTGGGCGTCG CCAAAGAGAT TGTGTTCATG
ACGCCGGAAG GGGCCTATCT GAAGCTGCAC GGCGACACCG TCGAGGTGGG CGGGAATGGC
CCGTTCGTTT CCAAGAATGC CGGTCACCAA TGGGAGGGCC CGGCGAGTAT GAGCGCGGAC
CTGCCCAAGT TCGACCACGG CGCGGTGGGG CGCGTGCCCA AGCTGGTGCG CGACCTGGAC
CGGTCGGCCG CGAGCGGCTG CCAGGGCGAA GTCAAGCAAG CCACCGGAGG CGCCTCGCCG
GGCCAGACCA ATGCCTCAGG CGAGCTTTCC GCCGTCAAGA GCGGCCGGCT CGAACAACTG
GTCGTCAACT TCTTCAAGAA CCGCAGCTAA
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| Protein sequence | MRYENTFTCV LRGVPLTPDY DPRIDLPRTE PMSAVVVGPQ GEEVHCDAMG RYKLQFVGLH
AEDHAHAQGA GTSGTDRDSA WVRAGNLWAG QQYGINMPLR AGMEVLVAFA NGNPDRPYIT
AVLPGWNNMP ATFSNTGSLP GNRYVSGIKT QEIKGPGHNQ LRLDDTSGQI SGQLASTHAH
SQLNLGYLTH PREEGQGTPR GEGLEARSDA HVAVRSGMAM LLSAWQRLKA SGEQLERAEY
LQLMQDSLDL FKSLGDYAEQ HQGVAMDTQP QGALAATIKG WPDQPGTTQG DPAAQAAIGI
TAPAGISLAT PKAVVTYAGS NVDTVAQKHV QITSGERTNL HAGGGLSLFA HQDGISAIAN
QGKLRLQSQA DDTLIDSAKN IHWTAVDGKL VGVAKEIVFM TPEGAYLKLH GDTVEVGGNG
PFVSKNAGHQ WEGPASMSAD LPKFDHGAVG RVPKLVRDLD RSAASGCQGE VKQATGGASP
GQTNASGELS AVKSGRLEQL VVNFFKNRS
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