| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3205 |
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| Symbol | |
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| ID | 1222068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3464759 |
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| End bp | 3467881 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637239623 |
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| Product | transmembrane drug efflux protein |
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| Protein accession | NP_521326 |
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| Protein GI | 17547924 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.228213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0965469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCAAG GTCGTTTCAA CCTATCGGCG CTCGCCGTGC GCGAGCGCGC CGTCACTCTG
TTCCTCATCT GCCTGATCTC TCTGGCGGGG CTCATTTCCT TCTTCAAGCT GGGCCGTGCG
GAAGACCCGG CGTTTACGGT CAAGGTGATG ACCATCATCA CCGCGTGGCC GGGCGCGACC
GCGCAGGAAA TGCAAGACCA GGTCGCCGAG AAGATCGAGA AGCGCATACA GGAGCTGCGC
TGGTATGACC GCACGGAAAC GTACACCCGG CCGGGCCTGG CGTTCACCAC GTTGACCCTG
CTCGATAGCA CGCCGCCATC GGAAGTCCAG GAGGAGTTCT ATCAAGCGCG CAAGAAGGTC
AGCGACGAGG TGGCCAACCT CCCGCCCGGC GTGATCGGGC CGATGGTCAA TGACGAATAT
GCGGACGTGA CCTTTGCGCT GTTTGCGCTC AAGGCGCAGG GCGAACCACA ACGTGTGCTC
GTGCGCGACG CGGAGACACT GCGCCAGCGA TTACTGCACG TGCCCGGCGT GAAGAAGGTC
AACATCATCG GCGAGCAGTC GGAGCGCATC TACGTCGAGT TTTCACATGA CCGGTTGGCG
ACGCTCGGCG TGAGTCCGCA AGAGGTGTTT GCTGCGCTCA ACAACCAGAA TGCCCTGACG
GCGGCCGGCT CGGTAGAAAC GAAAGGGCCG CAGGTCTTCA TCCGCCTGGA CGGTGCGTTC
GACGAGCTGC AGAAGATTCG CGATACGCCG GTTGTATCGC AGGGCCGCAC GTTGAAGCTG
TCGGACATTG CCACGGTCAA GCGCGGCTAT GAAGATCCGG CCACGTTCAT GGTGCGCAAT
GGTGGGCAGC CTGCCTTGCT GCTGGGCATC GTCATGCGCG AAGGCTGGAA CGGGCTGGAC
CTTGGCAAGG CGCTCGACAA GGAGGTCGGC GCCATCAACG CCGACATGCC GCTCGGCATG
AGCTTGACCA AGGTGACGGA CCAGGCGGTC AACATCAGCG CTGCCGTCGA TGAGTTCATG
CTCAAGTTCT TCGCAGCGCT GCTGGTGGTC ATGCTGGTGA GCTTCGTCAG CATGGGCTGG
CGCGCGGGCC TAGTGGTGGC CGCGGCCGTG CCGTTGACAC TGGCGGTGGT CTTCGTGGTG
ATGGCGGCCA CAGGCAAGAA CTTCGACCGC ATCACGCTTG GATCTTTGAT TCTGGCGCTG
GGCTTGCTGG TGGATGACGC CATCATCGCC ATCGAAATGA TGGTCGTGAA GATGGAAGAG
GGCTACAGCC GCGTCGCCGC TTCGGCCTAT GCGTGGAGCC ACACTGCGGC GCCCATGCTA
TCGGGCACGC TGGTGACCGC TGTCGGCTTC ATGCCCAATG GTTTTGCGCG ATCCACCGCG
GGTGAATACA CCAGCAACAT GTTCTGGATC GTGGGCATTG CGCTGATTGC GTCCTGGGTT
GTCGCGGTGG TGTTCACGCC TTACCTGGGT GTGAAGATGC TGCCCGACTT CAAGAAGGTC
GAAGGCGGCC ACGATGCGAT TTACGACACG CCACGCTACA ACCGCTTCCG TGCGCTGCTC
GGGCGTGTGA TTGCGCGCAA ATGGCTGGTC GCGGGTTCGG TCGTCGGGCT CTTCGCCTTG
GCCATCCTCG GCATGGCGGT GGTCAAGAAA CAGTTCTTCC CGATCTCGGA TCGACCCGAA
GTACTGGTCG AAGTGCAGAT GCCCTATGGC ACGTCGATCA ACCAGACCAG CGCAGCCACC
GCAAAGCTGG AAGCTTGGCT CGCCAAACAG AAGGAAGCCC AGATCGTGAC GTCGTATGTT
GGCCAGGGTG CGCCGCGCTT CTATCTGGCA ATGGGGCCGG AACTGCCGGA TTCGTCGTTC
GCCAAGATCG TGATCCGCAC TGACAGCCAG GAAGAACGTG ACGCATTGAA GCAGCGCCTG
CGCCAGGCCA TTGCCGACGG TCTTGCCCCC GAGGCGCGTG TGCGTGTTAC CCAGCTCGTG
TTCGGTCCGT ATTCTCCGTT CCCGGTTGCC TACCGCGTGA CCGGCCCGGA TGCGGAGACG
TTGCGCCGCA TCGCGGCCGA TGTCCGGCAA GTCATGGACG CCAGCCCGAT GATGCGCACG
GTCAATACCG ATTGGGGAAT GCGTGTACCT ACGCTGCACT TCACCTTGCA GCAGGACCGC
TTGCAGGCCG TGGGGCTGAC CTCCAGCGCC GTCGCGCAAC AACTGCAATT CCTGCTCAAC
GGCATTCCTG TGACGGCGGT GCGCGAGGAC ATCCGCACCG TGCAGGTGAC CGCGCGCTCG
GCCGGCGACA TCCGACTTGA TCCGGCCAAG ATTGGCGACT TCACACTGGC TGGCGCCAAC
GGGCAGCGCG TTCCGCTCTC GCAGGTGGGC AAGATCGATG TGCGCATGGA AGAGCCCATC
ATCCGCCGGC GCGATCGCAT GCCGACCATC ACGGTGCGAG GCGATATTGC CGATGGCCTG
CAACCGCCCG ACGTGTCGAC AGCCCTCAGC AAGCAGCTTC AGCCGATCAT CGAGAAACTG
CCCAGCGGAT ACCGCATTGA ACAAGCGGGT TCCATCGAAG AATCGGGCAA AGCGACGAAG
GCCATGCTGC CGCTGTTCCC GATCATGCTG GCAGTTACCC TGCTGATTCT CATCTTCCAG
GTGCGGTCCA TCCCGGCGAT GGTCATGGTG TTCCTGACCA GCCCCCTCGG CCTGATTGGT
GTCGTACCCA CCTTGATTCT GTTCGGGCAG CCGTTCGGCA TCAACGCGCT GGTCGGCCTA
ATTGCGCTGT CGGGCATCTT GATGCGCAAC ACGCTGATCC TGATCGGGCA GATTCAGCAC
AACAAAGAGG AAGGGTTGGA TCCGTTCACA GCCGTTGTGG AAGCCACCGT CCAGCGTGCG
CGTCCAGTGA TTCTTACCGC ATTGGCAGCC ATCCTGGCCT TCATTCCGCT GACCCATTCG
GTGTTCTGGG GCGCGCTGGC TTACACGCTC ATCGGTGGGA CGTTCGCCGG GACGATCTTG
ACCCTGGTGT TTTTGCCGGC CATGTACTCC ATCTGGTTCC GGATCCGGCC CAACAACGCG
GCTGATGCCC AGCGCGATCG GCAGGAGCAA GTGCAGCCCA CCGGACAACT GGTGCCCGAG
TAA
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| Protein sequence | MSQGRFNLSA LAVRERAVTL FLICLISLAG LISFFKLGRA EDPAFTVKVM TIITAWPGAT
AQEMQDQVAE KIEKRIQELR WYDRTETYTR PGLAFTTLTL LDSTPPSEVQ EEFYQARKKV
SDEVANLPPG VIGPMVNDEY ADVTFALFAL KAQGEPQRVL VRDAETLRQR LLHVPGVKKV
NIIGEQSERI YVEFSHDRLA TLGVSPQEVF AALNNQNALT AAGSVETKGP QVFIRLDGAF
DELQKIRDTP VVSQGRTLKL SDIATVKRGY EDPATFMVRN GGQPALLLGI VMREGWNGLD
LGKALDKEVG AINADMPLGM SLTKVTDQAV NISAAVDEFM LKFFAALLVV MLVSFVSMGW
RAGLVVAAAV PLTLAVVFVV MAATGKNFDR ITLGSLILAL GLLVDDAIIA IEMMVVKMEE
GYSRVAASAY AWSHTAAPML SGTLVTAVGF MPNGFARSTA GEYTSNMFWI VGIALIASWV
VAVVFTPYLG VKMLPDFKKV EGGHDAIYDT PRYNRFRALL GRVIARKWLV AGSVVGLFAL
AILGMAVVKK QFFPISDRPE VLVEVQMPYG TSINQTSAAT AKLEAWLAKQ KEAQIVTSYV
GQGAPRFYLA MGPELPDSSF AKIVIRTDSQ EERDALKQRL RQAIADGLAP EARVRVTQLV
FGPYSPFPVA YRVTGPDAET LRRIAADVRQ VMDASPMMRT VNTDWGMRVP TLHFTLQQDR
LQAVGLTSSA VAQQLQFLLN GIPVTAVRED IRTVQVTARS AGDIRLDPAK IGDFTLAGAN
GQRVPLSQVG KIDVRMEEPI IRRRDRMPTI TVRGDIADGL QPPDVSTALS KQLQPIIEKL
PSGYRIEQAG SIEESGKATK AMLPLFPIML AVTLLILIFQ VRSIPAMVMV FLTSPLGLIG
VVPTLILFGQ PFGINALVGL IALSGILMRN TLILIGQIQH NKEEGLDPFT AVVEATVQRA
RPVILTALAA ILAFIPLTHS VFWGALAYTL IGGTFAGTIL TLVFLPAMYS IWFRIRPNNA
ADAQRDRQEQ VQPTGQLVPE
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