| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3182 |
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| Symbol | |
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| ID | 1222045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 3440524 |
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| End bp | 3442275 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637239600 |
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| Product | activation/secretion signal peptide protein |
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| Protein accession | NP_521303 |
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| Protein GI | 17547901 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGA AACCTCTCAC GCTGGCGGCG GCGTTGCTGT CCGTGGCAAC CGCCCACGCG
CAGGTCCTGC CGCCCGCGCC ACCGGGTCCG GTGCTCGAAG ACCCGGCCCA GCGCGCCCAG
CGCGAGCGCC AGGACACCGA GCGCCGCCGC GAGGCCACGC AGCCCGCGCC GCAGATTGCC
GTCGCGCCGT CGGTGCCCGA TGACGCCGCC GTCGATGCGG TGGCCGAGCC GGGCACGACC
TTCGACATCC ACCGCATCGA GCTGACCGGC AACACGGTGC TGGATGCGGA AACGGTCGAG
CGCGTCACGC AGCCGTTCGT GAACCGCGCG CTCGGCACCA ACCGCATCAA CCTGCTGCTG
CGCCGGCTGA CCGAAGCGTT CGTCGCGCGC GGCTTTGTCA CCACGCGCGC TTACCTGGCG
CCGCAGAACC TCAAGGTGGG CGTGCTGACC ATCGCCGTGG TGCCGGGCAA GGTCGAGGCG
CTGCAGATCA ACGGCAAGAC GGTCCGTACC ACGGTGCCCG ATGCCAAACT GGCCGAAGGA
CCGCAGGCCG GCGGCTGGCT GACCGATGCC GGCACCGTGT GGTCGATGCC GGCGGTGGGC
GACACGCTCA GGCTGTCCGA TCTGGAGCAG GGCGTCGACC AGATCAACCG CCTGCGCCGC
AACCAGGCCG AGGTGCAGAT CCTGCCGGGC CAGGCGCCGG GCGGCTCCGT GATCGCGCTG
GCCAACCAGC CGGGCGACCG CTTCCGCTTC AGCGCTGGCA CCGACAACTA CGGCAGCCGC
GCCACCGGCA CCACGCGGCT GCGCGCCGGC ATCGACGCGG ACAACGCGCT CGGCTTGCAG
GAGGCCGTGT CGCTGTCGTA CATCGGCACG CGCGACACCA ACGCGGCCAT CGTCTCGGCG
GCCGTGCCGT TCGGCTACAA CACCTTCAGC TATACCGGCT CGCTGTCGGA GTACAACAGC
CTGATCGGCG ATACGGCGCT GCTCTATGGG CGCACGTTCG CGCATGCCTT CGGCTGGAAC
CGCGTGATCG AGCGCGACCC GGGCGGCCGC ACCGCGTTCG ACGTCACGCT CACGCACCGG
CGCAGCGAGC GCGAGGTCAA CAACCTGCTG TTCGAGCCGC AGAGCCTGTC GGTGCTGCGC
GTGGCCGTCA ACGGTCTGCG CAAGTTCGCC GTCGGCAACC AGGGCGGCTA TGCGACCTGG
GAGGCGGGCC TGTCGCGCGG CATGGACGCG CTCAATGCGA GCCACGATGC GCCGGACATC
ACGCGCGACG AGGCGCATAG CCAGTTCTGG AAGCTGGACG GCAACGCCAG CACCCAACTG
CCGCTTCCCG CCATCGGCCG CGCCGCGCTG GCCTACCGTG GGCAGGTGTT GGCGCAGTGG
TCGAACGTCG CGCTGTTCGG CTCGGAGCAG ATCTTTGCCG GCGGCATGGG CTCGGTGCGC
GGCTTCCGCG AGGGGCTGAT CAGCGGCGAT CGCGGCCTGA CGCTGCGCAA CGAAGTGGTG
TGGGGCAACG TGCCCGTGCT GGCCGGCGTG CGCATCGAGC CCTATGTCTT CCTGGACGGC
GGACAGACGC AGCTGGTGGC GAACCAGCAC TGGCAGTACC TGGCCGGCAC CGGCATGGGC
GTGCGGCTGG CCGCGAATGC CGGCAAGCAT GCCTTCACCA GCGAGCTGCT GCTTGGGCGC
GCGCTGGTGC AACCCGCGGA ACTTGGCAGC AAGGCAACGG TCTTGCTGGC CACAATGAAC
TACTCGTTTT AG
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| Protein sequence | MALKPLTLAA ALLSVATAHA QVLPPAPPGP VLEDPAQRAQ RERQDTERRR EATQPAPQIA
VAPSVPDDAA VDAVAEPGTT FDIHRIELTG NTVLDAETVE RVTQPFVNRA LGTNRINLLL
RRLTEAFVAR GFVTTRAYLA PQNLKVGVLT IAVVPGKVEA LQINGKTVRT TVPDAKLAEG
PQAGGWLTDA GTVWSMPAVG DTLRLSDLEQ GVDQINRLRR NQAEVQILPG QAPGGSVIAL
ANQPGDRFRF SAGTDNYGSR ATGTTRLRAG IDADNALGLQ EAVSLSYIGT RDTNAAIVSA
AVPFGYNTFS YTGSLSEYNS LIGDTALLYG RTFAHAFGWN RVIERDPGGR TAFDVTLTHR
RSEREVNNLL FEPQSLSVLR VAVNGLRKFA VGNQGGYATW EAGLSRGMDA LNASHDAPDI
TRDEAHSQFW KLDGNASTQL PLPAIGRAAL AYRGQVLAQW SNVALFGSEQ IFAGGMGSVR
GFREGLISGD RGLTLRNEVV WGNVPVLAGV RIEPYVFLDG GQTQLVANQH WQYLAGTGMG
VRLAANAGKH AFTSELLLGR ALVQPAELGS KATVLLATMN YSF
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