Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3155 |
Symbol | |
ID | 1222018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3408633 |
End bp | 3409811 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239573 |
Product | putative antibiotic hydrolase signal peptide protein |
Protein accession | NP_521276 |
Protein GI | 17547874 |
COG category | [V] Defense mechanisms |
COG ID | [COG4257] Streptogramin lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCC TGCTGTACCT GGCCGCGCCG GCCATCGTGG GCGCAGCCCT TCTCTGCCTG CCGGCCCCGT CCTCGGCTGC CGCGAATGCG GTGGGCGCCA ACGCCGTGAT CGGCGAATTC GCGACGCCGT CCGCCGCCAG TTCGCCGCAG GGCGTGGATG TCGCCGGCGA CGGCAGCGTG TGGTACTCGG AAACCACGGC GGGAAAAATC GCCGTGCTGC GCCCGGATGG CTCTTCGGCC GAATTCCCGG TGCCCAACGG GGGTCAGCCT TTCATCCTCA AGGTGGCGGA TGACGGCGTC TGGTTTACCG ACAGCGGGAC GCGCGCCATC GGGCATCTGG ACCCGGCCAC CGGGACGGTC GAGACCTACG CAATTCCGTC CGGCGCATCG CCGTTCTTTA TCCAGGTCGG CCCGGACGGC AGCAAATGGT TTACCGAGAC CGCGGGCATC GGTCGCCTCT CGCCGAATGG CGAGTTCACC GAGTGGACGG TGACGCTGGA GCATGCCGAC GACAACATGG AACAGCTGAG CCTGGATCCC TGGGGCAATG TCTGGTTCGT GGAGCGCAAT TTCGATGGCA TTGGCGCGGC CGGTACCAAC AAGGTGCGCC GTCTCAATCC CTATTCGAAC GTGATCAGCA CCTACAGGGT GCCGACGCTG GGCGGCACGC CGTCGGGCGT GGTGGCCAAT GCCAACGGGT CGGTCTGGGT GTCCGAGTAC TACGCCAATG CGATCGCCTT GCTCAACCCC TTCGCCGCTC CGCACAGCGA TGAGGTGGTG CAGCCCAACG CGCTGAAGGC CGACAGCCGG ACCGCATCGG TGTCGCCCAT CCGGGCCGCG CGCACGACGG GCGCGAAGAC GCAGGTCACC CCCAGCGCCC ACGCGGTCAA GCCGTCCGTG ACGCTGGGCT GGATCGAATA TCCCCTCCCG AGCGCCAAGG CCGAGCCGGA AGACATGCGT GTCGATCGGC ATGGCCGCGT CTGGTTCGAG GCGGACGCCG GCTTCATCGG CCGCCTCGAT CCCTTCGAGG CGCGCATCAC GGAATACATG ATCCCGTCGG CCAACAGCGG CTACTACAAC ATCGCGCTGG ACCCGCGCTC CGGCTTGCTC TGGTTTACCG AGGCCGGTGT CTTCGCGCCG GTGACGACCA AGATCGGCTA TCTGGACACG CGGCACTGA
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Protein sequence | MKRLLYLAAP AIVGAALLCL PAPSSAAANA VGANAVIGEF ATPSAASSPQ GVDVAGDGSV WYSETTAGKI AVLRPDGSSA EFPVPNGGQP FILKVADDGV WFTDSGTRAI GHLDPATGTV ETYAIPSGAS PFFIQVGPDG SKWFTETAGI GRLSPNGEFT EWTVTLEHAD DNMEQLSLDP WGNVWFVERN FDGIGAAGTN KVRRLNPYSN VISTYRVPTL GGTPSGVVAN ANGSVWVSEY YANAIALLNP FAAPHSDEVV QPNALKADSR TASVSPIRAA RTTGAKTQVT PSAHAVKPSV TLGWIEYPLP SAKAEPEDMR VDRHGRVWFE ADAGFIGRLD PFEARITEYM IPSANSGYYN IALDPRSGLL WFTEAGVFAP VTTKIGYLDT RH
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