| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3134 |
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| Symbol | |
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| ID | 1221998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3380300 |
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| End bp | 3381544 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637239552 |
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| Product | putative MSF transporter transmembrane protein |
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| Protein accession | NP_521255 |
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| Protein GI | 17547853 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCGC CGGACTCGCC CGATGGCCGG CGCCTCGTGC TGCTGCTCGG CCTCGCGCAG
ACGATCTCGT GGGGCACGCT GTACTTCGCC TTCACCGTCT TTCTCGCGCC GATGCACGAC
ACGCTCGGCT GGACGCGGCC GTTCCTGGCA GGCGGGTTCT CGCTGGGGCT GCTGGTGTGG
GCGCTGTGCT CGTTCCTGGT GGGCCGCACG CTGGAGCGCT GGCCGGCGCG CCGAGTGATG
GGCACCGGTT CGGTGCTGGC GGCGGCCAGC CTGCTGGCCT GGTCGCAGGT CGGCGGCGAG
ACCGCCTTTC TGCTGCTGTG GCTGCCGATG GGCGTGGCCA TGGCGACCAC GCTGTACGAC
CCGGCCTTCG TCGTGCTGCG CCAGGCTTTC GGCGATGCCT ACCAGCGCCC GATCGTCGGG
CTCACACTGA TCGCCGGGTT CGCCAGCACG ATCGGCATCC CGCTGGCGCA ATGGGGCGTG
GCGCACGTCG GCTGGCGCCA CACCCTGCAG GCGTTCGCGC TGCTGCACCT GCTCGTCTGC
CTGCCGATCC ACGCACGGCT GCGGGTCCGC CCGCCGGCCC AGGTCATGGC CGGGTCCGCT
GCGGCTGCGG CGGCGCCGGT CACGCCGTCG GCGTGGCGCA TGGCCCTGCG CATGCCGGTG
TTCTGGGCGG TGGTGCTGGC CTTCGTCGCC GTCAGCCTGA TCGCGGCGGT GCTGGGCGCG
CACCTGATTC CGCTGCTGAG CGAGAAAGGC GTGCCGATCG GCCGGCAGCT GGTGATCGCC
GCGCTGATCG GCCCGGCCCA GGTACTGGGG CGGCTGGCGA TGATGCGCCT GCGCGCAGCG
CATCCGGTGC GCATCGCGCC GTTCACCTAT GCGGCCATGG CGGCGGCGCT GGCGATGCTG
GCGCTGTCCG GCGGGCCGCT GCTGCTGGCC GCGGCCGTGC TGTATGGCGC GGCCAACGGC
ATCAACACCA TGCTGCGCGC CATCGCCATG CCGGAGCTGG TCTCGCGCGC CCAGTACGCC
ACCCTCAACG GCCTGATGAT GACGCCCGTG CTGCTGGCCC AGGCCAGCGG GCCCTGGCTG
GGCGCGCTGT TGTGGAAAGC CACCGGCGGC TACGCGGCGG TGGAATGGGC GATGGCGGCG
GCGGCCCTGG TCGCCCTGGC AGCCTTCACC TATGGCCTGC GGCACGCCCC GGCCAGCGCG
GTGCACGCCA ACGCCGAGCC GCCGCATGTG ACGCAGGCGC CGTGA
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| Protein sequence | MLSPDSPDGR RLVLLLGLAQ TISWGTLYFA FTVFLAPMHD TLGWTRPFLA GGFSLGLLVW
ALCSFLVGRT LERWPARRVM GTGSVLAAAS LLAWSQVGGE TAFLLLWLPM GVAMATTLYD
PAFVVLRQAF GDAYQRPIVG LTLIAGFAST IGIPLAQWGV AHVGWRHTLQ AFALLHLLVC
LPIHARLRVR PPAQVMAGSA AAAAAPVTPS AWRMALRMPV FWAVVLAFVA VSLIAAVLGA
HLIPLLSEKG VPIGRQLVIA ALIGPAQVLG RLAMMRLRAA HPVRIAPFTY AAMAAALAML
ALSGGPLLLA AAVLYGAANG INTMLRAIAM PELVSRAQYA TLNGLMMTPV LLAQASGPWL
GALLWKATGG YAAVEWAMAA AALVALAAFT YGLRHAPASA VHANAEPPHV TQAP
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