| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3128 |
|---|
| Symbol | exaC |
|---|
| ID | 1221992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 3372902 |
|---|
| End bp | 3374422 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637239546 |
|---|
| Product | putative NAD+ dependent acetaldehyde dehydrogenase oxidoreductase protein |
|---|
| Protein accession | NP_521249 |
|---|
| Protein GI | 17547847 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACG CCCATCCCGG CACGCCCGGC GCCGTGGTTT CGTTCCAGTC GCGCTACGGC
AACTACATCG GCGGCCGGTT CGTGCCGCCC GTCAAGGGGC AGTACTTCAC CAACACCACG
CCGGTGACGG GCGAGGCCAT CGCCGAATTC CCGCGCTCCA CCGCCGAGGA CATCGACCGC
GCGCTCGACG CCGCCCACGC CGCGGCCGAC GCCTGGGGCC GCACCTCGGC GCAGGACCGT
TCGCTGATCC TGCTGAAGAT CGCCGACCGC ATCGAGCAGA ACCTGGAGCG GCTGGCCGTG
ACCGAGACCT GGGACAACGG CAAGCCGATC CGCGAAACGC TGAATGCGGA CATTCCGCTC
GCGGCGGATC ACTTCCGCTA CTTCGCCGGC TGCATCCGCG CGCAGGAGGG CGCGGCGGCG
GAGATCAACG AGCACACCGT AGCGTATCAC ATCCACGAAC CGCTGGGCGT GGTCGGGCAG
ATCATCCCGT GGAACTTCCC GCTGCTGATG GCGGCGTGGA AGCTGGCGCC CGCGCTGGCG
GCCGGCAACT GCATCGTGCT CAAGCCGGCC GAGCAGACGC CGCTGGGCAT CTGCGTGCTG
CTGGAGCTGA TCGGCGACCT GCTGCCGCCG GGCGTGCTCA ACGTGGTGCA CGGCTTCGGC
AAGGAAGCCG GCGAGGCGCT GGCCACCAGC AAGCGCATCG CCAAGATCGC CTTCACGGGC
TCGACGCCGG TGGGCTCGCA TATCCTGAAG TGCGCGGCGG AGAACATCAT TCCGTCGACG
GTGGAGCTGG GCGGCAAGTC GCCCAACATC TACTTCGAAG ACATCATGCA GGCCGAGTCG
AGCTTCATCG AGAAGGCGGC CGAAGGGCTG GTGCTGGGCT TCTTCAACCA GGGCGAGGTG
TGCACGTGCC CGTCGCGCGC GCTGGTGCAG GAGTCGATCT ACGGCAGCTT CATGGACGCG
GTGATGGCCA AGGTGGCCGC CATCAAGCGC GGCGACCCGC TCGACACCGA GACCATGGTC
GGCGCGCAAG CCTCGGAGCA GCAGTTCAAC AAGATCCGCA CCTACCTCGA GATCGCGCGG
GAAGAGGGCG CTGAATGCCT GGCGGGCGGC GAGGCCGAGG CCATGTCGGG CAAGCTGGCC
AACGGCTACT ACATCAAGCC GACGCTGCTC AAGGGCCACA ACAATATGCG CGTGTTCCAG
GAAGAGATCT TCGGCCCGGT GATCGCCGTG ACGACCTTCC AGGACGAGGC GCAGGCCATC
CAGATCGCCA ACGACACCGA GTACGGCCTG GGCGCCGGCG TGTGGACGCG CGACATCAAC
CGCGCCTACC GTGTCGGCCG CGCCATCAAG GCCGGGCGCG TGTGGACCAA CTGCTACCAC
CTGTACCCGG CGCACGCGGC CTTCGGCGGC TACAAGAAAT CGGGCGTGGG CCGCGAGACC
CACAAGATGA TGCTCGACCA CTACCAGCAG ACCAAGAACC TGCTGGTGAG CTACGACACC
CGGCCGCTCG GCTTTTTCTG A
|
|---|
| Protein sequence | MRYAHPGTPG AVVSFQSRYG NYIGGRFVPP VKGQYFTNTT PVTGEAIAEF PRSTAEDIDR
ALDAAHAAAD AWGRTSAQDR SLILLKIADR IEQNLERLAV TETWDNGKPI RETLNADIPL
AADHFRYFAG CIRAQEGAAA EINEHTVAYH IHEPLGVVGQ IIPWNFPLLM AAWKLAPALA
AGNCIVLKPA EQTPLGICVL LELIGDLLPP GVLNVVHGFG KEAGEALATS KRIAKIAFTG
STPVGSHILK CAAENIIPST VELGGKSPNI YFEDIMQAES SFIEKAAEGL VLGFFNQGEV
CTCPSRALVQ ESIYGSFMDA VMAKVAAIKR GDPLDTETMV GAQASEQQFN KIRTYLEIAR
EEGAECLAGG EAEAMSGKLA NGYYIKPTLL KGHNNMRVFQ EEIFGPVIAV TTFQDEAQAI
QIANDTEYGL GAGVWTRDIN RAYRVGRAIK AGRVWTNCYH LYPAHAAFGG YKKSGVGRET
HKMMLDHYQQ TKNLLVSYDT RPLGFF
|
|---|
| |