| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc3122 |
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| Symbol | |
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| ID | 1221986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 3361405 |
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| End bp | 3364968 |
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| Gene Length | 3564 bp |
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| Protein Length | 1187 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637239540 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | NP_521243 |
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| Protein GI | 17547841 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCC CTCTGAACGA CGCGCTACGC CGCGCGCTCG AAACCGTTTC CCTGGACGAC
AAATACACAC TGGAGCGCGG CCGCATCTAT ATCAGCGGGA CGCAGGCGCT GGTGCGGCTG
CCGATGCTGC AGCAGGAGCG CGATCGCATT GCCGGGCTCA ATACGGCGGG CTTCATTTCG
GGCTACCGCG GCTCGCCGCT GGGTGCGCTG GACCAGGCCT TGTGGAAGGC CCAGAAGCAT
CTCTCCGGCC ACAACATCGT CTTCCAGGCG GGGCTCAATG AAGACCTGGC CGCCACGTCG
GTCTGGGGCT CGCAGCAGGT CAACCTGTAT CCGTCGGCCA GGTTCGACGG CGTGTTCGGC
ATGTGGTACG GCAAGGGGCC GGGCGTGGAC CGCACCATCG ACGTGTTCAA GCACGCCAAC
TCGGCCGGCT CGTCGGCGCA CGGCGGCGTG CTGGTGCTGG CGGGCGACGA CCACGCGTGC
AAATCGTCCA CGCTGGCGCA CCAGTCGGAA CACGTGTTCA AGGCGGCCGG CATTCCGGTG
CTGTATCCGT CCAACGTGCA GGAGTATCTC GACTACGGCC TGCACGGCTG GGCGATGAGC
CGCTACTCCG GCCTGTGGGT AGCGATGAAG TGCGTGACGG ACGTGGTGGA ATCGTCGGCC
TCGGTCGATG TCGATCCGCA CCGCGCCGAG ATCGTGCTGC CCGAAGACTT CGTCATGCCG
GCGGGCGGCC TGAACATCCG CTGGCCCGAT CCGCCGCTGG TGCAGGAAGC CCGCCTGCTC
GACTACAAGT GGTACGCGGG CCTGGCCTAC GTGCGCGCCA ACAAGCTCGA CCGCGTGGTG
CTCGATTCGC CGCAGGCGCG CTTCGGCATC ATGACCGCCG GCAAGGCCTA CCTGGACGTG
CGCCAGGCGC TGGTCGACCT GGGCCTCGAT GACGAGACCT GCCGCCGCAT CGGCATCCGC
CTGTACAAGG TCGGCTGCGT GTGGCCGCTG GAGGCGCACG GCGCACGCGC CTTCGCCGAA
GGGCTGCAGG AAATCCTGGT GGTGGAAGAG AAGCGCCAGA TCCTCGAATA CCAGCTCAAG
GAAGAGCTGT ACAACTACCG CGACGACGTG CGTCCGCGCG TGTACGGCAA GTTCGACGAG
CGCGACAACG CCGGCGGCGA ATGGTCGGTG CCGATGGGCA ATTGGTTGCT GCCGGCGCAC
TACGAACTCT CCCCAGCGCT GATCGCCCGC GCCATCGCCA CGCGGCTGGA GAAGTTCGAG
CTGCCCTCCG ACGTGCGCGC GCGCATCGAG GCGCGCATCG CCATCATCGA CGCCAAGGAG
AAGGCGCTGG CCAAGCCCCG CATCACCGCC GAGCGCAAGC CGTGGTTCTG CTCGGGCTGC
CCGCACAACA CGTCGACCAA CGTGCCCGAG GGCTCGCGCG CGCTGGCCGG CATCGGCTGT
CACTACATGA CGGTGTGGAT GGACCGCAGC ACCAACACCT TCAGCCAGAT GGGCGGCGAA
GGCGTGGCGT GGATCGGCCA GATGCCGTTC TCGGGCGACA AGCACGTGTT CGCCAACCTG
GGCGACGGCA CGTACTACCA CTCGGGCCTG CTGGCGATCC GCGCGTCGAT CGCGGCCAAG
GTCAACATCA CCTACAAGCT GCTCTACAAC GATGCGGTGG CCATGACCGG CGGCCAGCCG
GTGGACGGCC CGCTGTCGGT GCCGCAGATC GCCGCGCAGG TGCATGCGGA AGGCACGTCG
CGCATCGTCA TCGTCACGGA CGAGCCCGAG AAGTACAACG CGGCGATCAA GCTGCCCGAG
GGCGTGACCG TGCACCACCG CGACCGCCTG GACGCCATCC AGCGCGAGCT GCGCGAGGTG
CCGGGCACCA GCGTGCTGAT CTACGACCAG ACCTGCGCCA CCGAGAAGCG CCGCCGCCGC
AAGCGCGGCA CCATGGCCGA TCCGGCGCGC CGCGCCTTTA TCAACGACGC GGTGTGCGAA
GGCTGCGGCG ACTGCTCGGT CAAGTCGAAC TGCCTGTCGG TCGAGCCGCT GGAAACGGAG
CTGGGCACCA AGCGCAAGAT CAACCAGTCG TCGTGCAACA AGGATTTCTC GTGCGTGAAC
GGCTTCTGCC CGAGCTTCGT GACGGCCGAA GGCGCGCAGG TGCGCAAGCC GGAATCGCGC
GGTGTGTCGA CGGACAGCCT GCCGCTGCTG CCGCATCCCG ACCTGCCCGC CATCCGGCGC
GCGTACGGCG TGCTGGTGAC CGGCGTGGGC GGCACCGGCG TGGTGACCAT CGGCGGGCTG
CTGGGCATGG CCGCGCACAT CGAGGGCAAG GGCGTGACCG TGCTCGACAT GGCGGGCCTG
GCGCAGAAAG GCGGCGCGGT GCTGTCACAC GTGCAGATCG GCGAGCGGCC GGACACCATC
CACGCCACGC GCATCGCCAT GGGCGAGGCG GATCTCGTGA TCGGCTGCGA TGCCATCGTC
TCGGCGTCGG ACGAAGTGCT GTCCAAGGTG CAGTTCGGCC AGACGCGCGC CATCGTCAAC
AGCGCGGCAA CGCCCACCGC CGATTTCATC AAGAACCCGA ACTGGCGCTT CCCGGGCAGC
TCGGCCGAGG CCGACATCCG CGCGGCCGTG GGCGATGCCT GCGCCTTCGA GGACGCCAGC
GCGCTGGCCG TGCGCCTGCT GGGCGACGCG ATCTACACCA ACCCGCTGGT GCTGGGCTTT
GCCTGGCAGA AGGGCTGGAT TCCGCTGACG TACGATGCGC TGCTGCGCGC CATCGAGCTC
AACGGCGTAT CGGTCGACAA GAACAAGACC GCCTTCGAAT GGGGCCGCCA CCTGGCACAT
GACCGCGAAG CCGTGCTGGC GCTGGCCGGC GCAGCCCCGC GCGCCAAGGC CGAGGTGATC
GCCCTGCCCG CCACGCTGGA CACGCTGATC GCCCGCCGCG TCGACCTGCT GACCGCCTAC
CAGAACGCCG CCTACGCCGA CGCATTCCGC GTCGTGGTGG AACGCGTGCG CACGGCCGAG
GCCGCCGTGG CCGGCGCCGG CCAGCCGCTG ACGCTGACCG AGGCCGTGGC GCGCAACCTG
TCCAGGCTGA TGGCGTACAA GGACGAGTAC GAAGTCGCCC GCCTGTACAC CGACCCGGCC
TTCCTCGACA AGCTGCGCGC CCAGTTCGAC GGCGAGCCCG GCCGCGACTA CCAGCTCAAC
TTCTGGCTCG CGCCGCCGCT GTGGGCCAAG CGCGACGAGA AGGGTCATCT GGTCAAGCAG
CGCTTCGGCC CGAACACGAT GCGCATCTTC AAGCTGCTCG CCAAGCTCAG GGGCCTGCGC
GGCACCGCGC TCGACGTCTT CGGCAAGACC GAGGAACGCC GCACCGAGCG TGCGCTGATC
GGTGAGTATC GCGCGCTGGT GGACGAGCTG GTGAGTGGGC TGTCGACGCA GAAGCTGGCG
CTGGCGATTG ATCTGGCGCG GCTGCCGGAA GACATCCGCG GCTTCGGCCA TGTGAAGGAG
GCCAATTTGG CGGCGGCGCG GGTGCGCTGG GGCAAGCTGC TGGCGCAGTG GCGGGATCCG
GGTGCGGCGC AGCGGGCGGC GTAG
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| Protein sequence | MNAPLNDALR RALETVSLDD KYTLERGRIY ISGTQALVRL PMLQQERDRI AGLNTAGFIS
GYRGSPLGAL DQALWKAQKH LSGHNIVFQA GLNEDLAATS VWGSQQVNLY PSARFDGVFG
MWYGKGPGVD RTIDVFKHAN SAGSSAHGGV LVLAGDDHAC KSSTLAHQSE HVFKAAGIPV
LYPSNVQEYL DYGLHGWAMS RYSGLWVAMK CVTDVVESSA SVDVDPHRAE IVLPEDFVMP
AGGLNIRWPD PPLVQEARLL DYKWYAGLAY VRANKLDRVV LDSPQARFGI MTAGKAYLDV
RQALVDLGLD DETCRRIGIR LYKVGCVWPL EAHGARAFAE GLQEILVVEE KRQILEYQLK
EELYNYRDDV RPRVYGKFDE RDNAGGEWSV PMGNWLLPAH YELSPALIAR AIATRLEKFE
LPSDVRARIE ARIAIIDAKE KALAKPRITA ERKPWFCSGC PHNTSTNVPE GSRALAGIGC
HYMTVWMDRS TNTFSQMGGE GVAWIGQMPF SGDKHVFANL GDGTYYHSGL LAIRASIAAK
VNITYKLLYN DAVAMTGGQP VDGPLSVPQI AAQVHAEGTS RIVIVTDEPE KYNAAIKLPE
GVTVHHRDRL DAIQRELREV PGTSVLIYDQ TCATEKRRRR KRGTMADPAR RAFINDAVCE
GCGDCSVKSN CLSVEPLETE LGTKRKINQS SCNKDFSCVN GFCPSFVTAE GAQVRKPESR
GVSTDSLPLL PHPDLPAIRR AYGVLVTGVG GTGVVTIGGL LGMAAHIEGK GVTVLDMAGL
AQKGGAVLSH VQIGERPDTI HATRIAMGEA DLVIGCDAIV SASDEVLSKV QFGQTRAIVN
SAATPTADFI KNPNWRFPGS SAEADIRAAV GDACAFEDAS ALAVRLLGDA IYTNPLVLGF
AWQKGWIPLT YDALLRAIEL NGVSVDKNKT AFEWGRHLAH DREAVLALAG AAPRAKAEVI
ALPATLDTLI ARRVDLLTAY QNAAYADAFR VVVERVRTAE AAVAGAGQPL TLTEAVARNL
SRLMAYKDEY EVARLYTDPA FLDKLRAQFD GEPGRDYQLN FWLAPPLWAK RDEKGHLVKQ
RFGPNTMRIF KLLAKLRGLR GTALDVFGKT EERRTERALI GEYRALVDEL VSGLSTQKLA
LAIDLARLPE DIRGFGHVKE ANLAAARVRW GKLLAQWRDP GAAQRAA
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