Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3113 |
Symbol | gspN |
ID | 1221977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3349300 |
End bp | 3350151 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637239531 |
Product | general secretory pathway N transmembrane protein |
Protein accession | NP_521234 |
Protein GI | 17547832 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGTGA GCATCGAAGC GCTGCCGCCG CTGCGCCTGC GACGGCGCGG GCCGGACGAA GACGAACGTG CGGGTCTGGG CTGGCGCATC GGCGCGGCCG CGGCCGCGTT AGCCGCGGTG GCCGTGACGG TGGTGGCGCA GTATCCGGCC GCATGGGCGG CCGAACGCGT GGCCGAGGCC ACCGGCCACC GCGTGCTGCT GGCCGATGCC CAGGGCAGTC TCTGGCAAGG CAGCGCCACG CTGGCGCTGA CCGCAGGCCC CGGCGCCGCC GATGCGACGG TGCTGCCCGG GCGGCTGTCG TGGTCGCTGG ATGCCTGGCC GCTGCTCACG GGCACGGTGC GCGCCCACCT GACGCACGAC CGCGCGATGG CGCAGCCGGT CACGCTGGCG GTATCGCGCG ACGGCTGGCA GGCCGATGCC GGGGCGATAA CGCTGCCGGC CTCGCTGCTG GCGGGCATCG GTGCGCCGTT CAACACGCTC AGGCTGGACG GCCAGTTGCG CGCGCAATGG ACGCCGCTGT CCGGCCGGTT CGGGCACGGC AAGGGCGCGC CGGACACGAT GCAGGGCGCG CTGACCCTCA TGCTTGAGCA GGTATCATCC AGCCTCAGCC GCGTGCGGCC GCTGGGCAGC TACCGCGCGG AGCTGGCATT CGGCGGCGCG GCGGGCGGAC CGGCCCGGCT GACGCTGTCG ACCCTCACCG GCCCGCTATC GCTGCAGGGC CAGGGAACGG TGGGCCGGGG TGCGCATTTT GACGGCGTGG CGCGTGCCAC GCCGGAGTCG GAACCGCTGT TGATCGGGCT GCTGAGCCTG ATGGGCCCGC GCGACGGCAC GGGCTATCGC CTACGCTTTT GA
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Protein sequence | MPVSIEALPP LRLRRRGPDE DERAGLGWRI GAAAAALAAV AVTVVAQYPA AWAAERVAEA TGHRVLLADA QGSLWQGSAT LALTAGPGAA DATVLPGRLS WSLDAWPLLT GTVRAHLTHD RAMAQPVTLA VSRDGWQADA GAITLPASLL AGIGAPFNTL RLDGQLRAQW TPLSGRFGHG KGAPDTMQGA LTLMLEQVSS SLSRVRPLGS YRAELAFGGA AGGPARLTLS TLTGPLSLQG QGTVGRGAHF DGVARATPES EPLLIGLLSL MGPRDGTGYR LRF
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