Gene RSc3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3113 
SymbolgspN 
ID1221977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3349300 
End bp3350151 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content74% 
IMG OID637239531 
Productgeneral secretory pathway N transmembrane protein 
Protein accessionNP_521234 
Protein GI17547832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGTGA GCATCGAAGC GCTGCCGCCG CTGCGCCTGC GACGGCGCGG GCCGGACGAA 
GACGAACGTG CGGGTCTGGG CTGGCGCATC GGCGCGGCCG CGGCCGCGTT AGCCGCGGTG
GCCGTGACGG TGGTGGCGCA GTATCCGGCC GCATGGGCGG CCGAACGCGT GGCCGAGGCC
ACCGGCCACC GCGTGCTGCT GGCCGATGCC CAGGGCAGTC TCTGGCAAGG CAGCGCCACG
CTGGCGCTGA CCGCAGGCCC CGGCGCCGCC GATGCGACGG TGCTGCCCGG GCGGCTGTCG
TGGTCGCTGG ATGCCTGGCC GCTGCTCACG GGCACGGTGC GCGCCCACCT GACGCACGAC
CGCGCGATGG CGCAGCCGGT CACGCTGGCG GTATCGCGCG ACGGCTGGCA GGCCGATGCC
GGGGCGATAA CGCTGCCGGC CTCGCTGCTG GCGGGCATCG GTGCGCCGTT CAACACGCTC
AGGCTGGACG GCCAGTTGCG CGCGCAATGG ACGCCGCTGT CCGGCCGGTT CGGGCACGGC
AAGGGCGCGC CGGACACGAT GCAGGGCGCG CTGACCCTCA TGCTTGAGCA GGTATCATCC
AGCCTCAGCC GCGTGCGGCC GCTGGGCAGC TACCGCGCGG AGCTGGCATT CGGCGGCGCG
GCGGGCGGAC CGGCCCGGCT GACGCTGTCG ACCCTCACCG GCCCGCTATC GCTGCAGGGC
CAGGGAACGG TGGGCCGGGG TGCGCATTTT GACGGCGTGG CGCGTGCCAC GCCGGAGTCG
GAACCGCTGT TGATCGGGCT GCTGAGCCTG ATGGGCCCGC GCGACGGCAC GGGCTATCGC
CTACGCTTTT GA
 
Protein sequence
MPVSIEALPP LRLRRRGPDE DERAGLGWRI GAAAAALAAV AVTVVAQYPA AWAAERVAEA 
TGHRVLLADA QGSLWQGSAT LALTAGPGAA DATVLPGRLS WSLDAWPLLT GTVRAHLTHD
RAMAQPVTLA VSRDGWQADA GAITLPASLL AGIGAPFNTL RLDGQLRAQW TPLSGRFGHG
KGAPDTMQGA LTLMLEQVSS SLSRVRPLGS YRAELAFGGA AGGPARLTLS TLTGPLSLQG
QGTVGRGAHF DGVARATPES EPLLIGLLSL MGPRDGTGYR LRF