Gene RSc3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3112 
SymbolgspM 
ID1221976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3348718 
End bp3349296 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content71% 
IMG OID637239530 
Productgeneral secretory pathway M transmembrane protein 
Protein accessionNP_521233 
Protein GI17547831 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTT CCCCCAACGC TTCCAATGCC TCCGGCGGGC GCCGCCGGCT GCCCCGCATC 
GGCGTGCCCG ACGCGCTGCG CGATGCCGTG GCCGCTTTCT GGATGCAGCG CGAGCCGCGC
GAGCGCCGCA TCCTGGCCGG CGGCGGCGCG ATCCTGCTGC TGGTCATCGT CTATCTGCTG
TTCTGGGAAC CGGCCTTCGA AGGCCGCCGG CGCATTGAAA AGGCGCTGCC CGAAATGCGC
GGCCAGCTCG CCGAGATGGA AACGCTCGGC CAGGAAGCGC GCGAGCTGTC CGCCATTGCC
GCCACGCCGG TGCCGCACGG CAACGACCTG CAGGACGCGC TCAACACCAG CCTGACCGCG
CACGGACTGA AGGCCACGCG CATGGCCCTG TCCGGCGAGA GCGTGCAGGT GCAGCTCGAC
AAGGTTCCGT TCGGCGCGGT GGCCGAGTGG CTGCAGGAAG TGCGGCAGGC GCAGCGCATG
AAGGTGATCG ACGCCAGCAT CCGCTACGTG GGCGCGACCG CGCTGGTGAA CGTCACGGCA
ACGCTGCAAG GGCCGGGCGC CGGCGCCAGC GGCTACTGA
 
Protein sequence
MATSPNASNA SGGRRRLPRI GVPDALRDAV AAFWMQREPR ERRILAGGGA ILLLVIVYLL 
FWEPAFEGRR RIEKALPEMR GQLAEMETLG QEARELSAIA ATPVPHGNDL QDALNTSLTA
HGLKATRMAL SGESVQVQLD KVPFGAVAEW LQEVRQAQRM KVIDASIRYV GATALVNVTA
TLQGPGAGAS GY