Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3112 |
Symbol | gspM |
ID | 1221976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 3348718 |
End bp | 3349296 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637239530 |
Product | general secretory pathway M transmembrane protein |
Protein accession | NP_521233 |
Protein GI | 17547831 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3149] Type II secretory pathway, component PulM |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTT CCCCCAACGC TTCCAATGCC TCCGGCGGGC GCCGCCGGCT GCCCCGCATC GGCGTGCCCG ACGCGCTGCG CGATGCCGTG GCCGCTTTCT GGATGCAGCG CGAGCCGCGC GAGCGCCGCA TCCTGGCCGG CGGCGGCGCG ATCCTGCTGC TGGTCATCGT CTATCTGCTG TTCTGGGAAC CGGCCTTCGA AGGCCGCCGG CGCATTGAAA AGGCGCTGCC CGAAATGCGC GGCCAGCTCG CCGAGATGGA AACGCTCGGC CAGGAAGCGC GCGAGCTGTC CGCCATTGCC GCCACGCCGG TGCCGCACGG CAACGACCTG CAGGACGCGC TCAACACCAG CCTGACCGCG CACGGACTGA AGGCCACGCG CATGGCCCTG TCCGGCGAGA GCGTGCAGGT GCAGCTCGAC AAGGTTCCGT TCGGCGCGGT GGCCGAGTGG CTGCAGGAAG TGCGGCAGGC GCAGCGCATG AAGGTGATCG ACGCCAGCAT CCGCTACGTG GGCGCGACCG CGCTGGTGAA CGTCACGGCA ACGCTGCAAG GGCCGGGCGC CGGCGCCAGC GGCTACTGA
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Protein sequence | MATSPNASNA SGGRRRLPRI GVPDALRDAV AAFWMQREPR ERRILAGGGA ILLLVIVYLL FWEPAFEGRR RIEKALPEMR GQLAEMETLG QEARELSAIA ATPVPHGNDL QDALNTSLTA HGLKATRMAL SGESVQVQLD KVPFGAVAEW LQEVRQAQRM KVIDASIRYV GATALVNVTA TLQGPGAGAS GY
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