Gene RSc3106 details

Gene Information

• Locus tag: RSc3106
• Symbol: gspG
• ID: 1221970
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 3343963
• End bp: 3344433
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637239524
• Product: putative general secretion pathway G transmembrane protein
• Protein accession: NP_521227
• Protein GI: 17547825
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.590033
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.942813
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGCAAG GCCAACTCCG CACCCCCGTC CGCCAACGCG CCTTCGCCCG TCGCGCGGCA 
CGCGGCTTCA CGCTGATCGA GATCATGGTG GTGGTGGTGA TTCTCGGCAT CCTGGCCGCG 
CTGGTGGTCC CGAAGATCAT GAGCCGGCCC GATGAGGCGC GCATCATCGC GGCCAAGCAG 
GACATCGCTT CCATCTCGCA GGCGCTCAAG CTGTACCGGC TGGACAACGG CCGCTACCCG 
ACCACCGAGC AGGGCCTTGC CGCGCTGGTC ACCAAGCCGA CCACCGAGCC GGTCCCGAAC 
AACTGGAAGG GCGGCGGCTA TCTGGAACGC CTGCCGAAAG ACCCGTGGGG CCACCCGTAC 
CAGTACCTGA ACCCAGGCGT GCGCGGCGAA GTCGACATCT TCAGCTACGG CGCCGACGGC 
CAGCCCGGCG GCACCGCCAA CGATGCCGAC ATCGGCAACT GGGACAATTG A 

 

Protein sequence

MMQGQLRTPV RQRAFARRAA RGFTLIEIMV VVVILGILAA LVVPKIMSRP DEARIIAAKQ 
DIASISQALK LYRLDNGRYP TTEQGLAALV TKPTTEPVPN NWKGGGYLER LPKDPWGHPY 
QYLNPGVRGE VDIFSYGADG QPGGTANDAD IGNWDN