Gene RSc3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3105 
SymbolgspC 
ID1221969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3343104 
End bp3343790 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content74% 
IMG OID637239523 
Productputative general secretion pathway related transmembrane protein 
Protein accessionNP_521226 
Protein GI17547824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.79717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.98729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC AACAGTCGTC CCGTCTGCTC AGCCTGGTGC TGTTCGCTGC CCTCTGTGCG 
CTGCTGGCCC ACTGGGTGCT GACGCTGTCG TCGCTGCGCT CGCTGAGCGT GCCGCGCGAA
GCGCGCGTGG CGCAGACCGA AGCGCTGGAA ACCGGCGCTG CCGTCACGCT GTTCGGCGGC
GGTCCGCAAA GCGGTCCGCG CGACGTGCAG GTCGCCGGCG TGGTGGCCGA TCTGGTCGAC
GGCAGCGGCG CGGCCATCGT GTCGATCGAC GGCGGCCCGC CGCAGGCCAT CCGCGCGGGC
AAGGCGCTGT CGCCCAGTCT GAAGCTGGTG GAGATCAAGG CCCGCGCGGT GGTGATCGAA
CGCAACGGCG TGCGCCAGGA GATCGCGCTG CCGGCCAGCG CCGTGGCCGG CGTCTCGCCT
GCCGCGCGCA ATGCGCCGCA GCCGCTGCCG CCGTCCGGCG CCGCCGCGCC GATGGCGACC
CCCGCCATGC CGCCGCCCCC GCCCAGCGCC ATGGTCGGCA ATCCGGCCAA CACCGCCATG
CCGGGCGCCG CACTGCCGCT CACGCCGGCG CTGCCCAACA TCAATGACGC CCAGAACGCG
CCCCAGCTCG GCATCACCGG TCCGCGCCAT CGTGGGGCCG CCGCTGCGCG CAAGGGCGTC
GGCCCCGACG ACGGCGTGGA CCACTGA
 
Protein sequence
MTVQQSSRLL SLVLFAALCA LLAHWVLTLS SLRSLSVPRE ARVAQTEALE TGAAVTLFGG 
GPQSGPRDVQ VAGVVADLVD GSGAAIVSID GGPPQAIRAG KALSPSLKLV EIKARAVVIE
RNGVRQEIAL PASAVAGVSP AARNAPQPLP PSGAAAPMAT PAMPPPPPSA MVGNPANTAM
PGAALPLTPA LPNINDAQNA PQLGITGPRH RGAAAARKGV GPDDGVDH