Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3096 |
Symbol | kefC |
ID | 1221960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3333347 |
End bp | 3335245 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239514 |
Product | glutathione-regulated potassium-efflux system protein KefC |
Protein accession | NP_521217 |
Protein GI | 17547815 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATCGC ACGATCTGCT CGCCAATTTC GTCATCTACC TGGCTGCGGC GGTGGCCGTC GTACCCCTGG CGCGCCGACT GGGACTGGGT TCGGTGCTCG GCTACCTGTT GGCCGGGGTG ATCGTCGGGC CGTGGGGTCT GCGGCTGATC ACCAATGTGC AGTCGATCCT GGATTTCTCC GAATTCGGCG TCGTGCTGAT GATGTTCGTG ATCGGGCTGG AGCTCGAGCC CGCGCGTCTG TGGTCGCTGC GGCGCAGCAT CTTCGGCTAC GGCGGGCTGC AGCTGGTGGT CTGCGCCCTG GCGGTCGGGC TGGCGGTGAT GGCCGTCGAC CACCCATGGC GCGCGGCCGT GGTGGCGGGG CTCGGGCTGG CGCTGTCGTC CACGGCCATC GCGCTGGCCA CGCTCGCCGA GCGCAACCTG ATGCGCACGC CGGCCGGCAC GGCGAGCTTC GGCATCCTGC TGTTCCAGGA CATCGCCGCC ATCCCGATGA TTGCGCTGCT GCCGCTGCTC GCGCCCGACA CCGGCGACAC CGCGGGCGGT CACCACTGGC TGGCGGCGGC CAAGGCGGTG GGTGTGGTGG CGGCGGTCAT CTTCGGCGGG CGGACCGTGC TGCGGCCGGT GCTGCGCGCG ATCGCCCGCA CCAACATGCG CGAGATGTTC ACCTCGTTCT CGCTGCTGCT GGTGGTAGGC ATTGCGCTGC TGATGCACAG CGTGGGCCTG TCGATGGCGC TGGGCGCCTT CATCGCCGGC GTGCTGCTGG CCGATTCCGA ATACCGCCAC GCGCTGGAGA CCGATATCGA GCCCTTCAAG GGGCTGCTGC TCGGGCTGTT CTTCCTCGCG GTCGGCATGT CGATCGACTT CGGTGTGCTG ATGCGCCAGC CGCTGGCGGT GGTGCTGCTT GTGGCGGTGT TCCTGGTGGT GAAGATCGGC GCGCTGCGCG TGCTGGCGAT GCGCTTCGGC ATCGCGCGGG GACAGGCATG GCTGTTTGCC TTTCTGCTGT CGCAGGGCGG CGAGTTCGCC TTCGTGATGT TCGGCCCCGG CGTGGCGGGC GACGTGCTGG GCGCGGAGAC GGCGGCCACG CTGAACCTGG TGGTGGCCCT GTCGATGGCG GCCACGCCGT TGCTGCTGCT GTTCCACGAC AAGATCCTGG CGCCGCGCCT GATGGCCGGC AAGACGCGCG CGCCGGACGC CATCGGCCCC CAGGGCAACG AGGTCATCAT CGCCGGCTTC GGCCGCTTCG GGCAGATCGT CGGCCGCCTG CTGTACAGCC AGGGCTATAC CGCCACCGTG CTCGACCACG ATCCCGACCA GGTCGACATG GTGCGGCGCT TCGGCTTCAA GGTGTTCTAC GGCGATGCCA CGCGCATGGA CCTGCTGGAA ACAGCCGGCG CCGATACTGC CCGCATCATG GTGGTCGCCA TCGACGACAT GGAGACCAGC CTGGAAGTGG TCGACCGCGT GCGCGAGCGC TTTCCGCGCC TGAAGCTCTA CGTGCGCGCA CGCAACGTGT CGCACGTGTA CCAGCTGCGC GACCGTGGGG TCGAGGGGAT CGAGCGGGAG ATGTTCGAGG GTTCGCTGAC ACTGGCCCGG CACGTGCTGG AGGGCCTGGG CAAAGAGCCT TACGAGGCAC TGCGCGTGGC GCAGACCTTC CGGCGCCATG CGTTGAATTC GATGGACCAG CTCTACCCGG TCTACCGAGA CCAGAAGAAG CTGGTGCCGC TCGCCCAGCA GGGCCGCGAG GAACTGGCCG AGATGTTCCG GCGCGACCGG CTCCAGCGCA AGCGCCTGCG CGAGAGCGGC ATGCCCTGGG GCGAAGGCGG CCCGCACACC GCCGGAGCGG ATGCGCAGGA TGCCGGCGAC GGCGACGCCG CCGGGACACC GGCGGCGCAC GAGGGCTGA
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Protein sequence | MQSHDLLANF VIYLAAAVAV VPLARRLGLG SVLGYLLAGV IVGPWGLRLI TNVQSILDFS EFGVVLMMFV IGLELEPARL WSLRRSIFGY GGLQLVVCAL AVGLAVMAVD HPWRAAVVAG LGLALSSTAI ALATLAERNL MRTPAGTASF GILLFQDIAA IPMIALLPLL APDTGDTAGG HHWLAAAKAV GVVAAVIFGG RTVLRPVLRA IARTNMREMF TSFSLLLVVG IALLMHSVGL SMALGAFIAG VLLADSEYRH ALETDIEPFK GLLLGLFFLA VGMSIDFGVL MRQPLAVVLL VAVFLVVKIG ALRVLAMRFG IARGQAWLFA FLLSQGGEFA FVMFGPGVAG DVLGAETAAT LNLVVALSMA ATPLLLLFHD KILAPRLMAG KTRAPDAIGP QGNEVIIAGF GRFGQIVGRL LYSQGYTATV LDHDPDQVDM VRRFGFKVFY GDATRMDLLE TAGADTARIM VVAIDDMETS LEVVDRVRER FPRLKLYVRA RNVSHVYQLR DRGVEGIERE MFEGSLTLAR HVLEGLGKEP YEALRVAQTF RRHALNSMDQ LYPVYRDQKK LVPLAQQGRE ELAEMFRRDR LQRKRLRESG MPWGEGGPHT AGADAQDAGD GDAAGTPAAH EG
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