Gene RSc3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc3096 
SymbolkefC 
ID1221960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp3333347 
End bp3335245 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content69% 
IMG OID637239514 
Productglutathione-regulated potassium-efflux system protein KefC 
Protein accessionNP_521217 
Protein GI17547815 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCGC ACGATCTGCT CGCCAATTTC GTCATCTACC TGGCTGCGGC GGTGGCCGTC 
GTACCCCTGG CGCGCCGACT GGGACTGGGT TCGGTGCTCG GCTACCTGTT GGCCGGGGTG
ATCGTCGGGC CGTGGGGTCT GCGGCTGATC ACCAATGTGC AGTCGATCCT GGATTTCTCC
GAATTCGGCG TCGTGCTGAT GATGTTCGTG ATCGGGCTGG AGCTCGAGCC CGCGCGTCTG
TGGTCGCTGC GGCGCAGCAT CTTCGGCTAC GGCGGGCTGC AGCTGGTGGT CTGCGCCCTG
GCGGTCGGGC TGGCGGTGAT GGCCGTCGAC CACCCATGGC GCGCGGCCGT GGTGGCGGGG
CTCGGGCTGG CGCTGTCGTC CACGGCCATC GCGCTGGCCA CGCTCGCCGA GCGCAACCTG
ATGCGCACGC CGGCCGGCAC GGCGAGCTTC GGCATCCTGC TGTTCCAGGA CATCGCCGCC
ATCCCGATGA TTGCGCTGCT GCCGCTGCTC GCGCCCGACA CCGGCGACAC CGCGGGCGGT
CACCACTGGC TGGCGGCGGC CAAGGCGGTG GGTGTGGTGG CGGCGGTCAT CTTCGGCGGG
CGGACCGTGC TGCGGCCGGT GCTGCGCGCG ATCGCCCGCA CCAACATGCG CGAGATGTTC
ACCTCGTTCT CGCTGCTGCT GGTGGTAGGC ATTGCGCTGC TGATGCACAG CGTGGGCCTG
TCGATGGCGC TGGGCGCCTT CATCGCCGGC GTGCTGCTGG CCGATTCCGA ATACCGCCAC
GCGCTGGAGA CCGATATCGA GCCCTTCAAG GGGCTGCTGC TCGGGCTGTT CTTCCTCGCG
GTCGGCATGT CGATCGACTT CGGTGTGCTG ATGCGCCAGC CGCTGGCGGT GGTGCTGCTT
GTGGCGGTGT TCCTGGTGGT GAAGATCGGC GCGCTGCGCG TGCTGGCGAT GCGCTTCGGC
ATCGCGCGGG GACAGGCATG GCTGTTTGCC TTTCTGCTGT CGCAGGGCGG CGAGTTCGCC
TTCGTGATGT TCGGCCCCGG CGTGGCGGGC GACGTGCTGG GCGCGGAGAC GGCGGCCACG
CTGAACCTGG TGGTGGCCCT GTCGATGGCG GCCACGCCGT TGCTGCTGCT GTTCCACGAC
AAGATCCTGG CGCCGCGCCT GATGGCCGGC AAGACGCGCG CGCCGGACGC CATCGGCCCC
CAGGGCAACG AGGTCATCAT CGCCGGCTTC GGCCGCTTCG GGCAGATCGT CGGCCGCCTG
CTGTACAGCC AGGGCTATAC CGCCACCGTG CTCGACCACG ATCCCGACCA GGTCGACATG
GTGCGGCGCT TCGGCTTCAA GGTGTTCTAC GGCGATGCCA CGCGCATGGA CCTGCTGGAA
ACAGCCGGCG CCGATACTGC CCGCATCATG GTGGTCGCCA TCGACGACAT GGAGACCAGC
CTGGAAGTGG TCGACCGCGT GCGCGAGCGC TTTCCGCGCC TGAAGCTCTA CGTGCGCGCA
CGCAACGTGT CGCACGTGTA CCAGCTGCGC GACCGTGGGG TCGAGGGGAT CGAGCGGGAG
ATGTTCGAGG GTTCGCTGAC ACTGGCCCGG CACGTGCTGG AGGGCCTGGG CAAAGAGCCT
TACGAGGCAC TGCGCGTGGC GCAGACCTTC CGGCGCCATG CGTTGAATTC GATGGACCAG
CTCTACCCGG TCTACCGAGA CCAGAAGAAG CTGGTGCCGC TCGCCCAGCA GGGCCGCGAG
GAACTGGCCG AGATGTTCCG GCGCGACCGG CTCCAGCGCA AGCGCCTGCG CGAGAGCGGC
ATGCCCTGGG GCGAAGGCGG CCCGCACACC GCCGGAGCGG ATGCGCAGGA TGCCGGCGAC
GGCGACGCCG CCGGGACACC GGCGGCGCAC GAGGGCTGA
 
Protein sequence
MQSHDLLANF VIYLAAAVAV VPLARRLGLG SVLGYLLAGV IVGPWGLRLI TNVQSILDFS 
EFGVVLMMFV IGLELEPARL WSLRRSIFGY GGLQLVVCAL AVGLAVMAVD HPWRAAVVAG
LGLALSSTAI ALATLAERNL MRTPAGTASF GILLFQDIAA IPMIALLPLL APDTGDTAGG
HHWLAAAKAV GVVAAVIFGG RTVLRPVLRA IARTNMREMF TSFSLLLVVG IALLMHSVGL
SMALGAFIAG VLLADSEYRH ALETDIEPFK GLLLGLFFLA VGMSIDFGVL MRQPLAVVLL
VAVFLVVKIG ALRVLAMRFG IARGQAWLFA FLLSQGGEFA FVMFGPGVAG DVLGAETAAT
LNLVVALSMA ATPLLLLFHD KILAPRLMAG KTRAPDAIGP QGNEVIIAGF GRFGQIVGRL
LYSQGYTATV LDHDPDQVDM VRRFGFKVFY GDATRMDLLE TAGADTARIM VVAIDDMETS
LEVVDRVRER FPRLKLYVRA RNVSHVYQLR DRGVEGIERE MFEGSLTLAR HVLEGLGKEP
YEALRVAQTF RRHALNSMDQ LYPVYRDQKK LVPLAQQGRE ELAEMFRRDR LQRKRLRESG
MPWGEGGPHT AGADAQDAGD GDAAGTPAAH EG